RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KLRG1Q96E93 195 aa19.22■□□□□ 0.67
CLN6-216ENST00000636876 PPP2R3BQ9Y5P8 575 aa19.22■□□□□ 0.67
CLN6-216ENST00000636876 FOCADQ5VW36 1801 aa19.21■□□□□ 0.67
CLN6-216ENST00000636876 USP5P45974 858 aa19.21■□□□□ 0.67
CLN6-216ENST00000636876 TCP10Q12799 353 aa19.21■□□□□ 0.67
CLN6-216ENST00000636876 CCDC129Q6ZRS4 1044 aa19.21■□□□□ 0.67
CLN6-216ENST00000636876 MAPKAPK5Q8IW41 473 aa19.21■□□□□ 0.67
CLN6-216ENST00000636876 FLT1P17948 1338 aa19.21■□□□□ 0.67
CLN6-216ENST00000636876 PRKAB2O43741 272 aa19.2■□□□□ 0.66
CLN6-216ENST00000636876 CDC45O75419 566 aa19.2■□□□□ 0.66
CLN6-216ENST00000636876 ITGBL1O95965 494 aaPredicted RBP19.2■□□□□ 0.66
CLN6-216ENST00000636876 GNAT2P19087 354 aa19.2■□□□□ 0.66
CLN6-216ENST00000636876 DLK2Q6UY11 383 aa19.2■□□□□ 0.66
CLN6-216ENST00000636876 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
CLN6-216ENST00000636876 ZFPM1Q8IX07 1006 aa19.2■□□□□ 0.66
CLN6-216ENST00000636876 RUFY2Q8WXA3 655 aa19.2■□□□□ 0.66
CLN6-216ENST00000636876 TMEM39BQ9GZU3 492 aa19.2■□□□□ 0.66
CLN6-216ENST00000636876 OSBPL5Q9H0X9 879 aaPredicted RBP19.2■□□□□ 0.66
CLN6-216ENST00000636876 SLC4A4Q9Y6R1 1079 aa19.2■□□□□ 0.66
CLN6-216ENST00000636876 RPAP1Q9BWH6 1393 aaPredicted RBP19.19■□□□□ 0.66
CLN6-216ENST00000636876 TRAF5O00463 557 aa19.19■□□□□ 0.66
CLN6-216ENST00000636876 MFAP1P55081 439 aaKnown RBP19.19■□□□□ 0.66
CLN6-216ENST00000636876 SDR42E1Q8WUS8 393 aa19.19■□□□□ 0.66
CLN6-216ENST00000636876 CDCA5Q96FF9 252 aa19.19■□□□□ 0.66
CLN6-216ENST00000636876 TEPSINQ96N21 525 aa19.19■□□□□ 0.66
CLN6-216ENST00000636876 ATP8A2Q9NTI2 1148 aa19.19■□□□□ 0.66
CLN6-216ENST00000636876 MKRN1Q9UHC7 482 aaKnown RBP19.19■□□□□ 0.66
CLN6-216ENST00000636876 PCNTO95613 3336 aa19.19■□□□□ 0.66
CLN6-216ENST00000636876 CCDC171Q6TFL3 1326 aa19.19■□□□□ 0.66
CLN6-216ENST00000636876 RAD50Q92878 1312 aa19.19■□□□□ 0.66
CLN6-216ENST00000636876 COL2A1P02458 1487 aaPredicted RBP19.18■□□□□ 0.66
CLN6-216ENST00000636876 PRAMEF18Q5VWM3 479 aa19.18■□□□□ 0.66
CLN6-216ENST00000636876 GSG1L2A8MUP6 293 aa19.17■□□□□ 0.66
CLN6-216ENST00000636876 FMR1Q06787 632 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLN6-216ENST00000636876 GIMAP6Q6P9H5 292 aa19.17■□□□□ 0.66
CLN6-216ENST00000636876 SH3BP5LQ7L8J4 393 aa19.17■□□□□ 0.66
CLN6-216ENST00000636876 ZSCAN29Q8IWY8 852 aaPredicted RBP19.17■□□□□ 0.66
CLN6-216ENST00000636876 CDAN1Q8IWY9 1227 aa19.17■□□□□ 0.66
CLN6-216ENST00000636876 JMYQ8N9B5 988 aa19.17■□□□□ 0.66
CLN6-216ENST00000636876 IL25Q9H293 177 aa19.17■□□□□ 0.66
CLN6-216ENST00000636876 DCP1AQ9NPI6 582 aaPredicted RBP19.17■□□□□ 0.66
CLN6-216ENST00000636876 SAP30BPQ9UHR5 308 aaKnown RBP19.17■□□□□ 0.66
CLN6-216ENST00000636876 NAV1Q8NEY1 1877 aa19.17■□□□□ 0.66
CLN6-216ENST00000636876 ATRNL1Q5VV63 1379 aa19.17■□□□□ 0.66
CLN6-216ENST00000636876 DDTLA6NHG4 134 aaPredicted RBP19.16■□□□□ 0.66
CLN6-216ENST00000636876 PATL2C9JE40 543 aaKnown RBP19.16■□□□□ 0.66
CLN6-216ENST00000636876 SGSM2O43147 1006 aa19.16■□□□□ 0.66
CLN6-216ENST00000636876 NBPF12Q5TAG4 269 aaPredicted RBP19.16■□□□□ 0.66
CLN6-216ENST00000636876 CASC1Q6TDU7 716 aa19.16■□□□□ 0.66
CLN6-216ENST00000636876 DDRGK1Q96HY6 314 aa19.16■□□□□ 0.66
CLN6-216ENST00000636876 EPB41L4AQ9HCS5 686 aaPredicted RBP19.16■□□□□ 0.66
CLN6-216ENST00000636876 PASKQ96RG2 1323 aa19.16■□□□□ 0.66
CLN6-216ENST00000636876 DDX60LQ5H9U9 1706 aaKnown RBP19.16■□□□□ 0.66
CLN6-216ENST00000636876 MYH1P12882 1939 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 FOXP2O15409 715 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 SUPT20HL1Q3ZLR7 823 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 VPS53Q5VIR6 699 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 CSRNP1Q96S65 589 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 ESYT1Q9BSJ8 1104 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 DHX36Q9H2U1 1008 aaKnown RBP19.15■□□□□ 0.66
CLN6-216ENST00000636876 MCM9Q9NXL9 1143 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 PALD1Q9ULE6 856 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
CLN6-216ENST00000636876 BAZ2AQ9UIF9 1905 aaKnown RBP19.14■□□□□ 0.65
CLN6-216ENST00000636876 APPP05067 770 aa19.14■□□□□ 0.65
CLN6-216ENST00000636876 HSPD1P10809 573 aaKnown RBP19.14■□□□□ 0.65
CLN6-216ENST00000636876 NF2P35240 595 aa19.14■□□□□ 0.65
CLN6-216ENST00000636876 NACAP1Q9BZK3 213 aa19.14■□□□□ 0.65
CLN6-216ENST00000636876 TRPM7Q96QT4 1865 aa19.14■□□□□ 0.65
CLN6-216ENST00000636876 ALX1Q15699 326 aa19.13■□□□□ 0.65
CLN6-216ENST00000636876 IFNL3Q8IZI9 196 aa19.13■□□□□ 0.65
CLN6-216ENST00000636876 HOOK2Q96ED9 719 aa19.13■□□□□ 0.65
CLN6-216ENST00000636876 CELF2O95319 508 aaKnown RBP19.12■□□□□ 0.65
CLN6-216ENST00000636876 POLR3DP05423 398 aaPredicted RBP19.12■□□□□ 0.65
CLN6-216ENST00000636876 HLA-DOAP06340 250 aa19.12■□□□□ 0.65
CLN6-216ENST00000636876 TDO2P48775 406 aa19.12■□□□□ 0.65
CLN6-216ENST00000636876 TTC6Q86TZ1 520 aa19.12■□□□□ 0.65
CLN6-216ENST00000636876 NAPBQ9H115 298 aa19.12■□□□□ 0.65
CLN6-216ENST00000636876 ZNF408Q9H9D4 720 aa19.12■□□□□ 0.65
CLN6-216ENST00000636876 PI4KBQ9UBF8 816 aa19.12■□□□□ 0.65
CLN6-216ENST00000636876 USP17L12C9JPN9 530 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 USP17L21D6R901 530 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 CYP2D6P10635 497 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 SLC4A8Q2Y0W8 1093 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 SBK1Q52WX2 424 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 CST9Q5W186 159 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 CTR9Q6PD62 1173 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 AMOTL1Q8IY63 956 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 DSCC1Q9BVC3 393 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 ARPP21Q9UBL0 812 aaPredicted RBP19.11■□□□□ 0.65
CLN6-216ENST00000636876 SIPA1L1O43166 1804 aa19.11■□□□□ 0.65
CLN6-216ENST00000636876 ZMYM6O95789 1325 aa19.1■□□□□ 0.65
CLN6-216ENST00000636876 PLCD1P51178 756 aa19.1■□□□□ 0.65
CLN6-216ENST00000636876 C12orf60Q5U649 245 aa19.1■□□□□ 0.65
CLN6-216ENST00000636876 DCAF15Q66K64 600 aa19.1■□□□□ 0.65
CLN6-216ENST00000636876 EHD4Q9H223 541 aa19.1■□□□□ 0.65
CLN6-216ENST00000636876 CYP2D7A0A087X1C5 515 aa19.09■□□□□ 0.65
CLN6-216ENST00000636876 PPP1R12BO60237 982 aaPredicted RBP19.09■□□□□ 0.65
CLN6-216ENST00000636876 TBC1D12O60347 775 aa19.09■□□□□ 0.65
CLN6-216ENST00000636876 FGAP02671 866 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms