RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 TRIM6-TRIM34B2RNG4 842 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 WDHD1O75717 1129 aaPredicted RBP9.91□□□□□ -0.82
PNKP-226ENST00000636840 HLA-DOAP06340 250 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 ADD2P35612 726 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 NFIAQ12857 509 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 LDLRAD1Q5T700 205 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 ERICH6BQ5W0A0 696 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 TTC6Q86TZ1 520 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 FOXP4Q8IVH2 680 aaPredicted RBP9.91□□□□□ -0.82
PNKP-226ENST00000636840 AMOTL1Q8IY63 956 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 MIGA1Q8NAN2 632 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 SH3RF3Q8TEJ3 882 aaPredicted RBP9.91□□□□□ -0.82
PNKP-226ENST00000636840 ZNF384Q8TF68 577 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 TGFBRAP1Q8WUH2 860 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 AIDAQ96BJ3 306 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 EVI5LQ96CN4 794 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 EDC3Q96F86 508 aaKnown RBP9.91□□□□□ -0.82
PNKP-226ENST00000636840 CCDC136Q96JN2 1154 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 TEPSINQ96N21 525 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 CSRNP1Q96S65 589 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 FSD1Q9BTV5 496 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 AK9Q5TCS8 1911 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 AKAP11Q9UKA4 1901 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 RNF113AO15541 343 aaKnown RBP9.9□□□□□ -0.82
PNKP-226ENST00000636840 INHBEP58166 350 aa9.9□□□□□ -0.82
PNKP-226ENST00000636840 DYNLL1P63167 89 aaKnown RBP9.9□□□□□ -0.82
PNKP-226ENST00000636840 TSHZ3Q63HK5 1081 aa9.9□□□□□ -0.82
PNKP-226ENST00000636840 MOB2Q70IA6 237 aa9.9□□□□□ -0.82
PNKP-226ENST00000636840 MIGA2Q7L4E1 593 aa9.9□□□□□ -0.82
PNKP-226ENST00000636840 CRACR2BQ8N4Y2 399 aaPredicted RBP9.9□□□□□ -0.82
PNKP-226ENST00000636840 PI4K2BQ8TCG2 481 aa9.9□□□□□ -0.82
PNKP-226ENST00000636840 RILPL2Q969X0 211 aa9.9□□□□□ -0.82
PNKP-226ENST00000636840 OSBPL5Q9H0X9 879 aaPredicted RBP9.9□□□□□ -0.82
PNKP-226ENST00000636840 OSBPL3Q9H4L5 887 aa9.9□□□□□ -0.82
PNKP-226ENST00000636840 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.9□□□□□ -0.82
PNKP-226ENST00000636840 PI4KBQ9UBF8 816 aa9.9□□□□□ -0.82
PNKP-226ENST00000636840 RPAP1Q9BWH6 1393 aaPredicted RBP9.89□□□□□ -0.83
PNKP-226ENST00000636840 ECM29Q5VYK3 1845 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 TBC1D12O60347 775 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 POLR3DP05423 398 aaPredicted RBP9.89□□□□□ -0.83
PNKP-226ENST00000636840 GNAT2P19087 354 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 CENPQQ7L2Z9 268 aaPredicted RBP9.89□□□□□ -0.83
PNKP-226ENST00000636840 MAPKAPK5Q8IW41 473 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 PLEKHM2Q8IWE5 1019 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 ZFPM1Q8IX07 1006 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 JMYQ8N9B5 988 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 OTUD7AQ8TE49 926 aaPredicted RBP9.89□□□□□ -0.83
PNKP-226ENST00000636840 APPBP2Q92624 585 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 WRNIP1Q96S55 665 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 DDX4Q9NQI0 724 aaKnown RBP9.89□□□□□ -0.83
PNKP-226ENST00000636840 ATP8A2Q9NTI2 1148 aa9.89□□□□□ -0.83
PNKP-226ENST00000636840 HERC5Q9UII4 1024 aaKnown RBP9.89□□□□□ -0.83
PNKP-226ENST00000636840 TCRBV5S4A2TA0A5A2 114 aa9.88□□□□□ -0.83
PNKP-226ENST00000636840 DDTLA6NHG4 134 aaPredicted RBP9.88□□□□□ -0.83
PNKP-226ENST00000636840 HIP1O00291 1037 aa9.88□□□□□ -0.83
PNKP-226ENST00000636840 MBD4O95243 580 aa9.88□□□□□ -0.83
PNKP-226ENST00000636840 SLC10A3P09131 477 aa9.88□□□□□ -0.83
PNKP-226ENST00000636840 ZBTB48P10074 688 aaPredicted RBP9.88□□□□□ -0.83
PNKP-226ENST00000636840 SREBF2Q12772 1141 aa9.88□□□□□ -0.83
PNKP-226ENST00000636840 OTUD7BQ6GQQ9 843 aa9.88□□□□□ -0.83
PNKP-226ENST00000636840 ADGRA1Q86SQ6 560 aa9.88□□□□□ -0.83
PNKP-226ENST00000636840 SALL3Q9BXA9 1300 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 MANSC4A6NHS7 340 aaPredicted RBP9.87□□□□□ -0.83
PNKP-226ENST00000636840 CA12O43570 354 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 CTNND1O60716 968 aaKnown RBP9.87□□□□□ -0.83
PNKP-226ENST00000636840 AOC2O75106 756 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 APPP05067 770 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 MFAP1P55081 439 aaKnown RBP9.87□□□□□ -0.83
PNKP-226ENST00000636840 KIF23Q02241 960 aaPredicted RBP9.87□□□□□ -0.83
PNKP-226ENST00000636840 MAP3K10Q02779 954 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 ERO1BQ86YB8 467 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.87□□□□□ -0.833e-6■■■■■ 38.3
PNKP-226ENST00000636840 RIOK1Q9BRS2 568 aaKnown RBP9.87□□□□□ -0.83
PNKP-226ENST00000636840 NACAP1Q9BZK3 213 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 ARMT1Q9H993 441 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 ELP3Q9H9T3 547 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 PICK1Q9NRD5 415 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 MCM9Q9NXL9 1143 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 SAP30BPQ9UHR5 308 aaKnown RBP9.87□□□□□ -0.83
PNKP-226ENST00000636840 ZNF112Q9UJU3 913 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 TAOK2Q9UL54 1235 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 FZD1Q9UP38 647 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 SLC4A4Q9Y6R1 1079 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 PAPPA2Q9BXP8 1791 aa9.87□□□□□ -0.83
PNKP-226ENST00000636840 FLT1P17948 1338 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 PPATQ06203 517 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 SPRYD7Q5W111 196 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 GIMAP6Q6P9H5 292 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.86□□□□□ -0.83
PNKP-226ENST00000636840 SH3BP5LQ7L8J4 393 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 RASAL3Q86YV0 1011 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 CDAN1Q8IWY9 1227 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 ZKSCAN4Q969J2 545 aaPredicted RBP9.86□□□□□ -0.83
PNKP-226ENST00000636840 STRBPQ96SI9 672 aaKnown RBP9.86□□□□□ -0.83
PNKP-226ENST00000636840 PUS7LQ9H0K6 701 aaKnown RBP9.86□□□□□ -0.83
PNKP-226ENST00000636840 CABP5Q9NP86 173 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 HELLSQ9NRZ9 838 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 GINM1Q9NU53 330 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 PPP4R2Q9NY27 417 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms