RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TDRD7Q8NHU6 1098 aaKnown RBP8.19□□□□□ -1.1
UPF3B-205ENST00000636792 JDP2Q8WYK2 163 aa8.19□□□□□ -1.1
UPF3B-205ENST00000636792 FAM84BQ96KN1 310 aaPredicted RBP8.19□□□□□ -1.1
UPF3B-205ENST00000636792 ECHDC1Q9NTX5 307 aa8.19□□□□□ -1.1
UPF3B-205ENST00000636792 DBNLQ9UJU6 430 aaKnown RBP8.19□□□□□ -1.1
UPF3B-205ENST00000636792 MAST3O60307 1309 aa8.19□□□□□ -1.1
UPF3B-205ENST00000636792 FAM205AQ6ZU69 1335 aa8.19□□□□□ -1.1
UPF3B-205ENST00000636792 WFS1O76024 890 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
UPF3B-205ENST00000636792 PTGDRQ13258 359 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 PLA2G2CQ5R387 149 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 TTC39AQ5SRH9 613 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 STRIP1Q5VSL9 837 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 HELBQ8NG08 1087 aaPredicted RBP8.18□□□□□ -1.1
UPF3B-205ENST00000636792 WDR66Q8TBY9 1149 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 NEUROD6Q96NK8 337 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 DBNDD2Q9BQY9 259 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 LNPKQ9C0E8 428 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 IL1RAPL2Q9NP60 686 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 ZNRF3Q9ULT6 936 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 GTF3C3Q9Y5Q9 886 aa8.18□□□□□ -1.1
UPF3B-205ENST00000636792 WDR90Q96KV7 1748 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 FZD9O00144 591 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 APBB1O00213 710 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 ECE2O60344 883 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 RPS12P25398 132 aaKnown RBP8.17□□□□□ -1.1
UPF3B-205ENST00000636792 PDE1AP54750 535 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 TIMM10P62072 90 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 TNIP1Q15025 636 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 AOC3Q16853 763 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 B4GALNT3Q6L9W6 998 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 CERS3Q8IU89 383 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 CD209Q9NNX6 404 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 PKD2L1Q9P0L9 805 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 COL4A5P29400 1685 aa8.17□□□□□ -1.1
UPF3B-205ENST00000636792 AXIN1O15169 862 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 EIF5BO60841 1220 aaKnown RBP8.16□□□□□ -1.1
UPF3B-205ENST00000636792 FRAT2O75474 233 aaPredicted RBP8.16□□□□□ -1.1
UPF3B-205ENST00000636792 COL1A1P02452 1464 aaPredicted RBP8.16□□□□□ -1.1
UPF3B-205ENST00000636792 PHKA1P46020 1223 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 RPIAP49247 311 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
UPF3B-205ENST00000636792 RASGRF1Q13972 1273 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 BMP2KLQ5H9B9 411 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 FOCADQ5VW36 1801 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 SPTY2D1Q68D10 685 aaPredicted RBP8.16□□□□□ -1.1
UPF3B-205ENST00000636792 OLFM4Q6UX06 510 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 ARHGAP27Q6ZUM4 889 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 PLEKHM2Q8IWE5 1019 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 SCUBE3Q8IX30 993 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 CYP4X1Q8N118 509 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 SPATA5Q8NB90 893 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 AGBL3Q8NEM8 1001 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 PI4K2BQ8TCG2 481 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 HAUS7Q99871 368 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 CCDC8Q9H0W5 538 aaPredicted RBP8.16□□□□□ -1.1
UPF3B-205ENST00000636792 ZNF277Q9NRM2 450 aaPredicted RBP8.16□□□□□ -1.1
UPF3B-205ENST00000636792 STK17AQ9UEE5 414 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 MYH2Q9UKX2 1941 aa8.16□□□□□ -1.1
UPF3B-205ENST00000636792 MYO5AQ9Y4I1 1855 aaKnown RBP8.16□□□□□ -1.1
UPF3B-205ENST00000636792 USP17L3A6NCW0 530 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 USP17L4A6NCW7 530 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 HIP1O00291 1037 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 CD2BP2O95400 341 aaKnown RBP8.15□□□□□ -1.1
UPF3B-205ENST00000636792 ZFYP08048 801 aaPredicted RBP8.15□□□□□ -1.1
UPF3B-205ENST00000636792 SLC10A3P09131 477 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 ADORA1P30542 326 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 MCAMP43121 646 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 GYG1P46976 350 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 RASSF7Q02833 373 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 CTC1Q2NKJ3 1217 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 ZSCAN25Q6NSZ9 544 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 USP17L1Q7RTZ2 530 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 CNTROBQ8N137 903 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 GPC2Q8N158 579 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 SPSB2Q99619 263 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 MRIQ9BWK5 157 aa8.15□□□□□ -1.1
UPF3B-205ENST00000636792 TLR7Q9NYK1 1049 aaKnown RBP8.15□□□□□ -1.1
UPF3B-205ENST00000636792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.15□□□□□ -1.1
UPF3B-205ENST00000636792 SMARCA5O60264 1052 aaPredicted RBP8.14□□□□□ -1.11
UPF3B-205ENST00000636792 MAP4K4O95819 1239 aaPredicted RBP8.14□□□□□ -1.11
UPF3B-205ENST00000636792 AVPP01185 164 aa8.14□□□□□ -1.11
UPF3B-205ENST00000636792 VIL1P09327 827 aaKnown RBP8.14□□□□□ -1.11
UPF3B-205ENST00000636792 KLRK1P26718 216 aa8.14□□□□□ -1.11
UPF3B-205ENST00000636792 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
UPF3B-205ENST00000636792 INSM1Q01101 510 aaPredicted RBP8.14□□□□□ -1.11
UPF3B-205ENST00000636792 TTC22Q5TAA0 569 aa8.14□□□□□ -1.11
UPF3B-205ENST00000636792 CIAPIN1Q6FI81 312 aa8.14□□□□□ -1.11
UPF3B-205ENST00000636792 PAXIP1Q6ZW49 1069 aaPredicted RBP8.14□□□□□ -1.11
UPF3B-205ENST00000636792 DPF2Q92785 391 aa8.14□□□□□ -1.11
UPF3B-205ENST00000636792 EVI5LQ96CN4 794 aa8.14□□□□□ -1.11
UPF3B-205ENST00000636792 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.14□□□□□ -1.11
UPF3B-205ENST00000636792 RNF181Q9P0P0 153 aa8.14□□□□□ -1.11
UPF3B-205ENST00000636792 HMG20BQ9P0W2 317 aa8.14□□□□□ -1.11
UPF3B-205ENST00000636792 RAD50Q92878 1312 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 SNAP23O00161 211 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 MLLT3P42568 568 aaPredicted RBP8.13□□□□□ -1.11
UPF3B-205ENST00000636792 GSTO1P78417 241 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 MAP3K12Q12852 859 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms