RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 TRAF7Q6Q0C0 670 aa4.92□□□□□ -1.62
CLN5-214ENST00000636705 UBR3Q6ZT12 1888 aa4.92□□□□□ -1.62
CLN5-214ENST00000636705 MORC1Q86VD1 984 aa4.92□□□□□ -1.62
CLN5-214ENST00000636705 GPC2Q8N158 579 aa4.92□□□□□ -1.62
CLN5-214ENST00000636705 CNBD1Q8NA66 436 aa4.92□□□□□ -1.62
CLN5-214ENST00000636705 GCC1Q96CN9 775 aa4.92□□□□□ -1.62
CLN5-214ENST00000636705 MRFAP1L1Q96HT8 127 aa4.92□□□□□ -1.62
CLN5-214ENST00000636705 SLC4A9Q96Q91 983 aa4.92□□□□□ -1.62
CLN5-214ENST00000636705 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.92□□□□□ -1.62
CLN5-214ENST00000636705 SRA1Q9HD15 236 aaKnown RBP4.92□□□□□ -1.62
CLN5-214ENST00000636705 ABT1Q9ULW3 272 aaKnown RBP4.92□□□□□ -1.62
CLN5-214ENST00000636705 WDR33Q9C0J8 1336 aaKnown RBP4.91□□□□□ -1.62
CLN5-214ENST00000636705 PKD1L3Q7Z443 1732 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 CCDC189A1A4V9 331 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 NFKBIEO00221 500 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 EPHX2P34913 555 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 VEGFBP49765 207 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 LBX1P52954 281 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 USP50Q70EL3 339 aaPredicted RBP4.91□□□□□ -1.62
CLN5-214ENST00000636705 CNTROBQ8N137 903 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 NAP1L5Q96NT1 182 aaPredicted RBP4.91□□□□□ -1.62
CLN5-214ENST00000636705 GNL3LQ9NVN8 582 aaKnown RBP4.91□□□□□ -1.62
CLN5-214ENST00000636705 KNSTRNQ9Y448 316 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 TAF1LQ8IZX4 1826 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 ATF4P18848 351 aaPredicted RBP4.91□□□□□ -1.62
CLN5-214ENST00000636705 TEFQ10587 303 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 ENOX2Q16206 610 aaKnown RBP4.91□□□□□ -1.62
CLN5-214ENST00000636705 SMIM5Q71RC9 77 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 DNAJC10Q8IXB1 793 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 CNPY4Q8N129 248 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 SIX5Q8N196 739 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 SUPT20HQ8NEM7 779 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 TPCN2Q8NHX9 752 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 CARD14Q9BXL6 1004 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 NYXQ9GZU5 481 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 PCDHB3Q9Y5E6 796 aa4.91□□□□□ -1.62
CLN5-214ENST00000636705 CCDC85CA6NKD9 419 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 POTECB2RU33 542 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 RNMTO43148 476 aaKnown RBP4.9□□□□□ -1.62
CLN5-214ENST00000636705 PRC1O43663 620 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 NR1I2O75469 434 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 DDNO94850 711 aaPredicted RBP4.9□□□□□ -1.62
CLN5-214ENST00000636705 ITGBL1O95965 494 aaPredicted RBP4.9□□□□□ -1.62
CLN5-214ENST00000636705 HSPA8P11142 646 aaKnown RBP4.9□□□□□ -1.62
CLN5-214ENST00000636705 MPSTP25325 297 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 GTF2E1P29083 439 aaPredicted RBP4.9□□□□□ -1.62
CLN5-214ENST00000636705 EIF5P55010 431 aaKnown RBP4.9□□□□□ -1.62
CLN5-214ENST00000636705 NFE2L2Q16236 605 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 SULT6B1Q6IMI4 303 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 FAM43BQ6ZT52 329 aaPredicted RBP4.9□□□□□ -1.62
CLN5-214ENST00000636705 USP48Q86UV5 1035 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 FMNL2Q96PY5 1086 aa4.9□□□□□ -1.62
CLN5-214ENST00000636705 ARFGEF1Q9Y6D6 1849 aa4.9□□□□□ -1.63
CLN5-214ENST00000636705 SRGNP10124 158 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 SEC13P55735 322 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 PLEKHG4Q58EX7 1191 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 MORN1Q5T089 497 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 NBPF5PQ86XG9 351 aaPredicted RBP4.89□□□□□ -1.63
CLN5-214ENST00000636705 GPR101Q96P66 508 aaPredicted RBP4.89□□□□□ -1.63
CLN5-214ENST00000636705 IL21Q9HBE4 155 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 CYLDQ9NQC7 956 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 SALL2Q9Y467 1007 aaPredicted RBP4.89□□□□□ -1.63
CLN5-214ENST00000636705 FUT2Q10981 343 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 EML3Q32P44 896 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 PRR5LQ6MZQ0 368 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 PRPF40BQ6NWY9 871 aaKnown RBP4.89□□□□□ -1.63
CLN5-214ENST00000636705 CCAR1Q8IX12 1150 aaKnown RBP4.89□□□□□ -1.63
CLN5-214ENST00000636705 HELQQ8TDG4 1101 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 SLC39A13Q96H72 371 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 OCSTAMPQ9BR26 566 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 PRKD2Q9BZL6 878 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 DDX21Q9NR30 783 aaKnown RBP eCLIP4.89□□□□□ -1.63
CLN5-214ENST00000636705 CDHR2Q9BYE9 1310 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 CLSPNQ9HAW4 1339 aa4.89□□□□□ -1.63
CLN5-214ENST00000636705 MAP2P11137 1827 aaKnown RBP4.89□□□□□ -1.63
CLN5-214ENST00000636705 KLRG2A4D1S0 409 aaPredicted RBP4.88□□□□□ -1.63
CLN5-214ENST00000636705 FZD9O00144 591 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 WDHD1O75717 1129 aaPredicted RBP4.88□□□□□ -1.63
CLN5-214ENST00000636705 KIF4AO95239 1232 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 IARSP41252 1262 aaKnown RBP4.88□□□□□ -1.63
CLN5-214ENST00000636705 NOGQ13253 232 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 PKN2Q16513 984 aaKnown RBP4.88□□□□□ -1.63
CLN5-214ENST00000636705 Q3C1V9 767 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 TJAP1Q5JTD0 557 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 CCDC102BQ68D86 513 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 BICDL1Q6ZP65 573 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 PKNOX2Q96KN3 472 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 CAPNS2Q96L46 248 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 FAM126AQ9BYI3 521 aaPredicted RBP4.88□□□□□ -1.63
CLN5-214ENST00000636705 C12orf49Q9H741 205 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 CHST12Q9NRB3 414 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 ZBTB1Q9Y2K1 713 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 TOGARAM1Q9Y4F4 1720 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 FAM221BA6H8Z2 402 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 NEFMP07197 916 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 ZEB1P37275 1124 aaPredicted RBP4.88□□□□□ -1.63
CLN5-214ENST00000636705 GJA8P48165 433 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 ZNF654Q8IZM8 581 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 PGBD3Q8N328 593 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 SRPK1Q96SB4 655 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms