RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 DIS3L2Q8IYB7 885 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 IFNL3Q8IZI9 196 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 CPLX3Q8WVH0 158 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 LY9Q9HBG7 655 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 CAMTA1Q9Y6Y1 1673 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 SLU7O95391 586 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 STX17P56962 302 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 LCORLQ8N3X6 602 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 CYP2D7A0A087X1C5 515 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 AFMP43652 599 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 SSRP1Q08945 709 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 PTPAQ15257 358 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 OLFM4Q6UX06 510 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 MPHOSPH8Q99549 860 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 DESI2Q9BSY9 194 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 PCDHB6Q9Y5E3 794 aa16.16■□□□□ 0.18
CACNA1A-228ENST00000636610 TOP1P11387 765 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 OSBPL5Q9H0X9 879 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 ZSWIM4Q9H7M6 989 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 SERTAD1Q9UHV2 236 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 SLC4A4Q9Y6R1 1079 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 MYL5Q02045 173 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 NTRK3Q16288 839 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 DZIP3Q86Y13 1208 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 SPATA5Q8NB90 893 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 ACSBG1Q96GR2 724 aa16.15■□□□□ 0.18
CACNA1A-228ENST00000636610 ERICH4A6NGS2 130 aa16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 MAP3K14Q99558 947 aa16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 CABP5Q9NP86 173 aa16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 OGFRQ9NZT2 677 aa16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 FMR1Q06787 632 aaKnown RBP eCLIP16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 SMYD4Q8IYR2 804 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 ADAMTS7Q9UKP4 1686 aa16.14■□□□□ 0.17
CACNA1A-228ENST00000636610 FANCGO15287 622 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 CDKL5O76039 1030 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 ARHGAP29Q52LW3 1261 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 JAG2Q9Y219 1238 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 NWD2Q9ULI1 1742 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 TOB1P50616 345 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 KARSQ15046 597 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 KRBA2Q6ZNG9 492 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 CCDC150Q8NCX0 1101 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 SAMSN1Q9NSI8 373 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 CPDO75976 1380 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 NRDCO43847 1150 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 KCNQ4P56696 695 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 EVX2Q03828 476 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 CARD10Q9BWT7 1032 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 MTMR7Q9Y216 660 aa16.13■□□□□ 0.17
CACNA1A-228ENST00000636610 NOM1Q5C9Z4 860 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 VGLL2Q8N8G2 317 aa16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 ZNF397Q8NF99 534 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 IRX2Q9BZI1 471 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 NFE2L3Q9Y4A8 694 aa16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 TTF1Q15361 905 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 NOSTRINQ8IVI9 506 aa16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 DHX58Q96C10 678 aa16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 ERO1AQ96HE7 468 aa16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 INTS13Q9NVM9 706 aa16.12■□□□□ 0.17
CACNA1A-228ENST00000636610 GSG1L2A8MUP6 293 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 MAP3K12Q12852 859 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 WTAPQ15007 396 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 SAFBQ15424 915 aaKnown RBP eCLIP16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 RTN1Q16799 776 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 RESP18Q5W5W9 173 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 KRI1Q8N9T8 703 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 CARD6Q9BX69 1037 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 ZNF446Q9NWS9 450 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 SLAIN2Q9P270 581 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 IMPACTQ9P2X3 320 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 TCRBV5S4A2TA0A5A2 114 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 MTF1Q14872 753 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 EPSTI1Q96J88 318 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 HPSEQ9Y251 543 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 ALS2Q96Q42 1657 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 KCPQ6ZWJ8 1503 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 MYO5AQ9Y4I1 1855 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 SEC31AO94979 1220 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 PUM3Q15397 648 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 SUSD4Q5VX71 490 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 CCDC24Q8N4L8 307 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 FEZ1Q99689 392 aa16.11■□□□□ 0.17
CACNA1A-228ENST00000636610 A0A0U1RQJ8 604 aa16.1■□□□□ 0.17
CACNA1A-228ENST00000636610 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms