RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 CLUAP1Q96AJ1 413 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 COA7Q96BR5 231 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 UTYO14607 1347 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 SOX1O00570 391 aaPredicted RBP9.19□□□□□ -0.94
CIITA-214ENST00000636238 TNPO2O14787 897 aaKnown RBP9.19□□□□□ -0.94
CIITA-214ENST00000636238 ENTPD3O75355 529 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 IFIT1P09914 478 aaKnown RBP9.19□□□□□ -0.94
CIITA-214ENST00000636238 RLBP1P12271 317 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 INPP5BP32019 993 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 MAP3K10Q02779 954 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 PUM3Q15397 648 aaKnown RBP9.19□□□□□ -0.94
CIITA-214ENST00000636238 FAM110CQ1W6H9 321 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 EPHA10Q5JZY3 1008 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 ZKSCAN2Q63HK3 967 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 SCYL3Q8IZE3 742 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 VGLL2Q8N8G2 317 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 ZNF594Q96JF6 807 aaPredicted RBP9.19□□□□□ -0.94
CIITA-214ENST00000636238 DEFB118Q96PH6 123 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 SRCIN1Q9C0H9 1055 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 PICK1Q9NRD5 415 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 PNMA3Q9UL41 463 aa9.19□□□□□ -0.94
CIITA-214ENST00000636238 SEMA3EO15041 775 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 HMGCRP04035 888 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 GCLCP48506 637 aaPredicted RBP9.18□□□□□ -0.94
CIITA-214ENST00000636238 BCAMP50895 628 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 CACNB3P54284 484 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 CHAF1AQ13111 956 aaPredicted RBP9.18□□□□□ -0.94
CIITA-214ENST00000636238 PABPC4Q13310 644 aaKnown RBP eCLIP9.18□□□□□ -0.94
CIITA-214ENST00000636238 METTL24Q5JXM2 366 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 TDHQ8IZJ6 230 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 DEFB123Q8N688 67 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 SMCR8Q8TEV9 937 aaPredicted RBP9.18□□□□□ -0.94
CIITA-214ENST00000636238 IDI2Q9BXS1 227 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 NBPF3Q9H094 633 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.18□□□□□ -0.94
CIITA-214ENST00000636238 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 STAP2Q9UGK3 403 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 FBXO3Q9UK99 471 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 COG6Q9Y2V7 657 aa9.18□□□□□ -0.94
CIITA-214ENST00000636238 ATRNL1Q5VV63 1379 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 RPTORQ8N122 1335 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 PHF20L1A8MW92 1017 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 CTNND1O60716 968 aaKnown RBP9.17□□□□□ -0.94
CIITA-214ENST00000636238 NPM3O75607 178 aaKnown RBP9.17□□□□□ -0.94
CIITA-214ENST00000636238 MAP4K4O95819 1239 aaPredicted RBP9.17□□□□□ -0.94
CIITA-214ENST00000636238 CYP2C8P10632 490 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 PTPRAP18433 802 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 FGFR2P21802 821 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 PDE3AQ14432 1141 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 GRIK5Q16478 980 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 CDC42EP5Q6NZY7 148 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 MIGA2Q7L4E1 593 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 TRMT44Q8IYL2 757 aaKnown RBP9.17□□□□□ -0.94
CIITA-214ENST00000636238 ZGPATQ8N5A5 531 aaKnown RBP9.17□□□□□ -0.94
CIITA-214ENST00000636238 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
CIITA-214ENST00000636238 LPIN2Q92539 896 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 LRCH3Q96II8 777 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 PAWRQ96IZ0 340 aaKnown RBP9.17□□□□□ -0.94
CIITA-214ENST00000636238 GNL3LQ9NVN8 582 aaKnown RBP9.17□□□□□ -0.94
CIITA-214ENST00000636238 MTMR10Q9NXD2 777 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 GABRQQ9UN88 632 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 AGTPBP1Q9UPW5 1226 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 AFG3L2Q9Y4W6 797 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 ZHX2Q9Y6X8 837 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 SPEF2Q9C093 1822 aa9.17□□□□□ -0.94
CIITA-214ENST00000636238 PDS5AQ29RF7 1337 aaKnown RBP9.16□□□□□ -0.94
CIITA-214ENST00000636238 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
CIITA-214ENST00000636238 TBC1D12O60347 775 aa9.16□□□□□ -0.94
CIITA-214ENST00000636238 SLC5A1P13866 664 aa9.16□□□□□ -0.94
CIITA-214ENST00000636238 TRIM27P14373 513 aa9.16□□□□□ -0.94
CIITA-214ENST00000636238 ATF7IPQ6VMQ6 1270 aa9.16□□□□□ -0.94
CIITA-214ENST00000636238 CCDC136Q96JN2 1154 aa9.16□□□□□ -0.94
CIITA-214ENST00000636238 PUS3Q9BZE2 481 aaKnown RBP9.16□□□□□ -0.94
CIITA-214ENST00000636238 HMX1Q9NP08 348 aaPredicted RBP9.16□□□□□ -0.94
CIITA-214ENST00000636238 OGDHLQ9ULD0 1010 aa9.16□□□□□ -0.94
CIITA-214ENST00000636238 COL6A3P12111 3177 aa9.16□□□□□ -0.94
CIITA-214ENST00000636238 F6X3S4 739 aa9.15□□□□□ -0.94
CIITA-214ENST00000636238 XRCC5P13010 732 aaKnown RBP9.15□□□□□ -0.94
CIITA-214ENST00000636238 ELNP15502 786 aa9.15□□□□□ -0.94
CIITA-214ENST00000636238 FTSJ3Q8IY81 847 aaKnown RBP9.15□□□□□ -0.94
CIITA-214ENST00000636238 TMEM57Q8N5G2 664 aa9.15□□□□□ -0.94
CIITA-214ENST00000636238 FAM163AQ96GL9 167 aaPredicted RBP9.15□□□□□ -0.94
CIITA-214ENST00000636238 KAZALD1Q96I82 304 aa9.15□□□□□ -0.94
CIITA-214ENST00000636238 SUCLG2Q96I99 432 aa9.15□□□□□ -0.94
CIITA-214ENST00000636238 C11orf49Q9H6J7 331 aa9.15□□□□□ -0.94
CIITA-214ENST00000636238 FAM198AQ9UFP1 575 aa9.15□□□□□ -0.94
CIITA-214ENST00000636238 LRRFIP2Q9Y608 721 aaKnown RBP9.15□□□□□ -0.94
CIITA-214ENST00000636238 A0A1B0GUL6 1792 aa9.14□□□□□ -0.95
CIITA-214ENST00000636238 RFX7Q2KHR2 1363 aa9.14□□□□□ -0.95
CIITA-214ENST00000636238 GAKO14976 1311 aa9.14□□□□□ -0.95
CIITA-214ENST00000636238 LDHBP07195 334 aaKnown RBP9.14□□□□□ -0.95
CIITA-214ENST00000636238 MS4A1P11836 297 aa9.14□□□□□ -0.95
CIITA-214ENST00000636238 KCNA4P22459 653 aa9.14□□□□□ -0.95
CIITA-214ENST00000636238 NFIAQ12857 509 aa9.14□□□□□ -0.95
CIITA-214ENST00000636238 MAP3K21Q5TCX8 1036 aa9.14□□□□□ -0.95
CIITA-214ENST00000636238 GADL1Q6ZQY3 521 aa9.14□□□□□ -0.95
CIITA-214ENST00000636238 C7orf61Q8IZ16 206 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms