RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SLFN14P0C7P3 912 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 TMEM253P0C7T8 217 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 PRKCSHP14314 528 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 ZNF157P51786 506 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 TTLL4Q14679 1199 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 TMEM67Q5HYA8 995 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 CIAPIN1Q6FI81 312 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 GTF3C2Q8WUA4 911 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 ASB11Q8WXH4 323 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 CLP1Q92989 425 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 FANCD2OSQ96PS1 177 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 TCF12Q99081 682 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 ZFYVE28Q9HCC9 887 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 DISC1Q9NRI5 854 aa2.44□□□□□ -2.02
SMARCB1-209ENST00000635578 TCAF2A6NFQ2 919 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 NUAK1O60285 661 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 ZNF862O60290 1169 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 NEFMP07197 916 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 HOXA5P20719 270 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 EHHADHQ08426 723 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 AP3B2Q13367 1082 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 KCNA10Q16322 511 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 ALKBH2Q6NS38 261 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 ATG14Q6ZNE5 492 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 CYFIP1Q7L576 1253 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 FBXO15Q8NCQ5 510 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 HEXIM2Q96MH2 286 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 IRF2BPLQ9H1B7 796 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 ZNF576Q9H609 170 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 CARS2Q9HA77 564 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 MKNK2Q9HBH9 465 aa2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 DCP1AQ9NPI6 582 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-209ENST00000635578 GNAT3A8MTJ3 354 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 ATG7O95352 703 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 USP5P45974 858 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 USPL1Q5W0Q7 1092 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 SPACA3Q8IXA5 215 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 GALNT12Q8IXK2 581 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 RELTQ969Z4 430 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 ISL2Q96A47 359 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 EHD4Q9H223 541 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 TNKS2Q9H2K2 1166 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 EPB41L4BQ9H329 900 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 CD320Q9NPF0 282 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 CCDC87Q9NVE4 849 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 RAPGEFL1Q9UHV5 662 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 PCOLCE2Q9UKZ9 415 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 SNX11Q9Y5W9 270 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 PITPNM2Q9BZ72 1349 aa2.42□□□□□ -2.02
SMARCB1-209ENST00000635578 ETV2O00321 342 aaPredicted RBP2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 FZD6O60353 706 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 BMP7P18075 431 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 LINC00310P59036 64 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 NKPD1Q17RQ9 610 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 CDKAL1Q5VV42 579 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 AMIGO3Q86WK7 504 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 KCNB2Q92953 911 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 C20orf173Q96LM9 149 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 ZCCHC4Q9H5U6 513 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 ATP13A1Q9HD20 1204 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 ANO2Q9NQ90 1003 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 C19orf73Q9NVV2 129 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 GTF2IRD1Q9UHL9 959 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 SMG5Q9UPR3 1016 aaKnown RBP2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 SYNGAP1Q96PV0 1343 aa2.41□□□□□ -2.02
SMARCB1-209ENST00000635578 FAM155AB1AL88 458 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 FOXD2O60548 495 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 FAM13AO94988 1023 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 ABL1P00519 1130 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 GSTP1P09211 210 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 ITPKAP23677 461 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 GDNFP39905 211 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 CLCN7P51798 805 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 SRPK2P78362 688 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 FAAP100Q0VG06 881 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 KIF4BQ2VIQ3 1234 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 UBE3DQ7Z6J8 389 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 GJD3Q8N144 294 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 KCNN1Q92952 543 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 HSPA12BQ96MM6 686 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 CSRNP1Q96S65 589 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 NPHS2Q9NP85 383 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 PARD6AQ9NPB6 346 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 PRDM10Q9NQV6 1147 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 PICK1Q9NRD5 415 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 SLAMF8Q9P0V8 285 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 PCDHGC5Q9Y5F6 944 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 CSADQ9Y600 493 aa2.4□□□□□ -2.03
SMARCB1-209ENST00000635578 A0A0G2JLL6 359 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 GADD45BO75293 160 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 RAC2P15153 192 aa2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 HNRNPUQ00839 825 aaKnown RBP eCLIP2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 ZNF211Q13398 564 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 KIAA0319Q5VV43 1072 aa2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 FAM214BQ7L5A3 538 aa2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 ABHD4Q8TB40 342 aa2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 ACSBG1Q96GR2 724 aa2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 FOXQ1Q9C009 403 aa2.39□□□□□ -2.03
SMARCB1-209ENST00000635578 ABCB6Q9NP58 842 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms