RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.1■□□□□ 0.65
LINC00339-207ENST00000634712 DNAJC2Q99543 621 aaKnown RBP19.1■□□□□ 0.65
LINC00339-207ENST00000634712 AATFQ9NY61 560 aaKnown RBP eCLIP19.1■□□□□ 0.65
LINC00339-207ENST00000634712 PCDHB15Q9Y5E8 787 aa19.1■□□□□ 0.65
LINC00339-207ENST00000634712 TNS4Q8IZW8 715 aa19.09■□□□□ 0.65
LINC00339-207ENST00000634712 OPTNQ96CV9 577 aa19.09■□□□□ 0.65
LINC00339-207ENST00000634712 ANTXR1Q9H6X2 564 aa19.09■□□□□ 0.65
LINC00339-207ENST00000634712 MAGEB6Q8N7X4 407 aa19.08■□□□□ 0.65
LINC00339-207ENST00000634712 SH3RF3Q8TEJ3 882 aaPredicted RBP19.08■□□□□ 0.65
LINC00339-207ENST00000634712 ZKSCAN4Q969J2 545 aaPredicted RBP19.08■□□□□ 0.65
LINC00339-207ENST00000634712 DDX4Q9NQI0 724 aaKnown RBP19.08■□□□□ 0.65
LINC00339-207ENST00000634712 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
LINC00339-207ENST00000634712 PPP4CP60510 307 aa19.07■□□□□ 0.64
LINC00339-207ENST00000634712 TMED8Q6PL24 325 aaPredicted RBP19.07■□□□□ 0.64
LINC00339-207ENST00000634712 BOLA2Q9H3K6 86 aa19.07■□□□□ 0.64
LINC00339-207ENST00000634712 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
LINC00339-207ENST00000634712 GOLIM4O00461 696 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 ATP5JP18859 108 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 AAMPQ13685 434 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 OTUD7BQ6GQQ9 843 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 OTUD5Q96G74 571 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 GPATCH3Q96I76 525 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 DDTLA6NHG4 134 aaPredicted RBP19.06■□□□□ 0.64
LINC00339-207ENST00000634712 ALDH1A1P00352 501 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 SH3BP5LQ7L8J4 393 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 ADGRA1Q86SQ6 560 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 ERO1BQ86YB8 467 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 CERS3Q8IU89 383 aa19.06■□□□□ 0.64
LINC00339-207ENST00000634712 OSBPL5Q9H0X9 879 aaPredicted RBP19.06■□□□□ 0.64
LINC00339-207ENST00000634712 INPP5BP32019 993 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 GJA5P36382 358 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 GTF2A2P52657 109 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 SLC9C2Q5TAH2 1124 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 MIGA1Q8NAN2 632 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 TGFBRAP1Q8WUH2 860 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 CNKSR2Q8WXI2 1034 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 PAG1Q9NWQ8 432 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 ZNF112Q9UJU3 913 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 SUPT16HQ9Y5B9 1047 aaKnown RBP19.05■□□□□ 0.64
LINC00339-207ENST00000634712 SNCAIPQ9Y6H5 919 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 RFX7Q2KHR2 1363 aa19.05■□□□□ 0.64
LINC00339-207ENST00000634712 MYO5AQ9Y4I1 1855 aaKnown RBP19.04■□□□□ 0.64
LINC00339-207ENST00000634712 SPDYE5A6NIY4 337 aa19.04■□□□□ 0.64
LINC00339-207ENST00000634712 TBC1D8O95759 1140 aa19.04■□□□□ 0.64
LINC00339-207ENST00000634712 DYNLL1P63167 89 aaKnown RBP19.04■□□□□ 0.64
LINC00339-207ENST00000634712 IFNL1Q8IU54 200 aa19.04■□□□□ 0.64
LINC00339-207ENST00000634712 ECHDC1Q9NTX5 307 aa19.04■□□□□ 0.64
LINC00339-207ENST00000634712 MAST2Q6P0Q8 1798 aa19.04■□□□□ 0.64
LINC00339-207ENST00000634712 MAPKAPK5Q8IW41 473 aa19.03■□□□□ 0.64
LINC00339-207ENST00000634712 HAUS7Q99871 368 aa19.03■□□□□ 0.64
LINC00339-207ENST00000634712 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.03■□□□□ 0.64
LINC00339-207ENST00000634712 DHX36Q9H2U1 1008 aaKnown RBP19.03■□□□□ 0.64
LINC00339-207ENST00000634712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.03■□□□□ 0.64
LINC00339-207ENST00000634712 OTOFQ9HC10 1997 aa19.02■□□□□ 0.64
LINC00339-207ENST00000634712 USP5P45974 858 aa19.02■□□□□ 0.64
LINC00339-207ENST00000634712 PPATQ06203 517 aa19.02■□□□□ 0.64
LINC00339-207ENST00000634712 EDC3Q96F86 508 aaKnown RBP19.02■□□□□ 0.64
LINC00339-207ENST00000634712 PICK1Q9NRD5 415 aa19.02■□□□□ 0.64
LINC00339-207ENST00000634712 PI4KBQ9UBF8 816 aa19.02■□□□□ 0.64
LINC00339-207ENST00000634712 ATRNL1Q5VV63 1379 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 CCL15-CCL14A0A0B4J2E2 113 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 MAGEB6P1A0A0J9YX57 407 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 TBC1D12O60347 775 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 PDE6AP16499 860 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 MAP3K10Q02779 954 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 PPIL2Q13356 520 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 SNAPC2Q13487 334 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 CCL15Q16663 113 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 NOL9Q5SY16 702 aaKnown RBP19.01■□□□□ 0.63
LINC00339-207ENST00000634712 GCC1Q96CN9 775 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 TRIM34Q9BYJ4 488 aa19.01■□□□□ 0.63
LINC00339-207ENST00000634712 CASP8AP2Q9UKL3 1982 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 TESPA1A2RU30 521 aaPredicted RBP19■□□□□ 0.63
LINC00339-207ENST00000634712 PHF20L1A8MW92 1017 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 IRF6O14896 467 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 CTNND1O60716 968 aaKnown RBP19■□□□□ 0.63
LINC00339-207ENST00000634712 CETPP11597 493 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 HDAC1Q13547 482 aaPredicted RBP19■□□□□ 0.63
LINC00339-207ENST00000634712 ANKRD45Q5TZF3 282 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 SCYL3Q8IZE3 742 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 MS4A4AQ96JQ5 239 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 FLT1P17948 1338 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 ZNF532Q9HCE3 1301 aa19■□□□□ 0.63
LINC00339-207ENST00000634712 DOCK2Q92608 1830 aa18.99■□□□□ 0.63
LINC00339-207ENST00000634712 IGF2BP3O00425 579 aaKnown RBP eCLIP18.99■□□□□ 0.63
LINC00339-207ENST00000634712 HLA-DOAP06340 250 aa18.99■□□□□ 0.63
LINC00339-207ENST00000634712 IFFO2Q5TF58 517 aa18.99■□□□□ 0.63
LINC00339-207ENST00000634712 ZSCAN25Q6NSZ9 544 aa18.99■□□□□ 0.63
LINC00339-207ENST00000634712 CRACR2BQ8N4Y2 399 aaPredicted RBP18.99■□□□□ 0.63
LINC00339-207ENST00000634712 EXOC6Q8TAG9 804 aa18.99■□□□□ 0.63
LINC00339-207ENST00000634712 RWDD1Q9H446 243 aaPredicted RBP18.99■□□□□ 0.63
LINC00339-207ENST00000634712 SAP30BPQ9UHR5 308 aaKnown RBP18.99■□□□□ 0.63
LINC00339-207ENST00000634712 HERC5Q9UII4 1024 aaKnown RBP18.99■□□□□ 0.63
LINC00339-207ENST00000634712 COL2A1P02458 1487 aaPredicted RBP18.99■□□□□ 0.63
LINC00339-207ENST00000634712 FOXP4Q8IVH2 680 aaPredicted RBP18.98■□□□□ 0.63
LINC00339-207ENST00000634712 BRI3BPQ8WY22 251 aa18.98■□□□□ 0.63
LINC00339-207ENST00000634712 PTPN18Q99952 460 aa18.98■□□□□ 0.63
LINC00339-207ENST00000634712 CRNKL1Q9BZJ0 848 aaKnown RBP18.98■□□□□ 0.63
LINC00339-207ENST00000634712 PALD1Q9ULE6 856 aa18.98■□□□□ 0.63
LINC00339-207ENST00000634712 FAM196BA6NMK8 535 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms