RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 NRG1Q02297 640 aaPredicted RBP6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 PTPN11Q06124 597 aaPredicted RBP6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 CWF19L2Q2TBE0 894 aaKnown RBP6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 SEZ6Q53EL9 994 aa6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 FAM196AQ6ZSG2 479 aa6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 KIAA1211Q6ZU35 1233 aa6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 HDXQ7Z353 690 aa6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 FBXO27Q8NI29 283 aa6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 GATAD2BQ8WXI9 593 aa6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 NKD1Q969G9 470 aa6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
GPCPD1-207ENST00000633552 KRTAP9-6A0A140TA67 174 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 KRBA1A5PL33 1030 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 C9orf172C9J069 976 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 FURINP09958 794 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 SELPP16109 830 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 RPL6Q02878 288 aaKnown RBP6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 SCARA3Q6AZY7 606 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 CCDC84Q86UT8 332 aaPredicted RBP6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 TINF2Q9BSI4 451 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 CEP41Q9BYV8 373 aa6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 PPP1R1BQ9UD71 204 aaPredicted RBP6.96□□□□□ -1.3
GPCPD1-207ENST00000633552 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 GRIN3BO60391 1043 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 ADH5P11766 374 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 GARTP22102 1010 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 ID3Q02535 119 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 MPP2Q14168 576 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 KIF4BQ2VIQ3 1234 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 LRFN4Q6PJG9 635 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 LENG1Q96BZ8 264 aaPredicted RBP6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 PLPPR2Q96GM1 343 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 EAF1Q96JC9 268 aaPredicted RBP6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 NT5C1AQ9BXI3 368 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 TMPRSS13Q9BYE2 586 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 PIDD1Q9HB75 910 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 USP35Q9P2H5 1018 aa6.95□□□□□ -1.3
GPCPD1-207ENST00000633552 DRD2P14416 443 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 CRKP46108 304 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 IREB2P48200 963 aaKnown RBP6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 CDK8P49336 464 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 ARID5AQ03989 594 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 GK5Q6ZS86 529 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 C12orf40Q86WS4 652 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.94□□□□□ -1.35e-8■□□□□ 10.7
GPCPD1-207ENST00000633552 TANGO6Q9C0B7 1094 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 ROBO2Q9HCK4 1378 aa6.94□□□□□ -1.3
GPCPD1-207ENST00000633552 GREM1O60565 184 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 RNGTTO60942 597 aaKnown RBP6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 CILPO75339 1184 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 RAB6AP20340 208 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 GJA8P48165 433 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 USP11P51784 963 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 ETF1P62495 437 aaKnown RBP6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 INPP5AQ14642 412 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 SF3A1Q15459 793 aaKnown RBP6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 REC114Q7Z4M0 266 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 CPLX3Q8WVH0 158 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 SPATA32Q96LK8 384 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 FERD3LQ96RJ6 166 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 BRMS1Q9HCU9 246 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 SSU72Q9NP77 194 aaKnown RBP6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 KCNQ5Q9NR82 932 aa6.93□□□□□ -1.3
GPCPD1-207ENST00000633552 FAM221AA4D161 298 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 MEGF11A6BM72 1044 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 TMPRSS2O15393 492 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 SSBP05455 408 aaKnown RBP eCLIP6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 HCLS1P14317 486 aaPredicted RBP6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 RXRBP28702 533 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 NASPP49321 788 aaPredicted RBP6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 SOX4Q06945 474 aaPredicted RBP6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 PPM1JQ5JR12 505 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 TMEM130Q8N3G9 435 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 SMG8Q8ND04 991 aaKnown RBP6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 WFDC12Q8WWY7 111 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 ATXN3LQ9H3M9 355 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 PPP1R9AQ9ULJ8 1098 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 SNCAIPQ9Y6H5 919 aa6.92□□□□□ -1.3
GPCPD1-207ENST00000633552 NOS3P29474 1203 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 ASPAP45381 313 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 PREPP48147 710 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 ZNF165P49910 485 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 PDE4BQ07343 736 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 MBTPS1Q14703 1052 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 ZC3H12AQ5D1E8 599 aaKnown RBP6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 CDC37L1Q7L3B6 337 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 UTP4Q969X6 686 aaKnown RBP6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 YIPF2Q9BWQ6 316 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 SUGCTQ9HAC7 445 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 GINM1Q9NU53 330 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 CACNA2D2Q9NY47 1150 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 PRKAG2Q9UGJ0 569 aa6.91□□□□□ -1.3
GPCPD1-207ENST00000633552 HIF3AQ9Y2N7 669 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms