RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 SDR42E1Q8WUS8 393 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
LIMS4-204ENST00000632897 HPS5Q9UPZ3 1129 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 LDHCP07864 332 aa16.68■□□□□ 0.26
LIMS4-204ENST00000632897 SART3Q15020 963 aaKnown RBP16.68■□□□□ 0.26
LIMS4-204ENST00000632897 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
LIMS4-204ENST00000632897 DDX11Q96FC9 970 aa16.68■□□□□ 0.26
LIMS4-204ENST00000632897 MASTLQ96GX5 879 aa16.68■□□□□ 0.26
LIMS4-204ENST00000632897 ZSCAN16Q9H4T2 348 aaPredicted RBP16.68■□□□□ 0.26
LIMS4-204ENST00000632897 GPBP1L1Q9HC44 474 aaPredicted RBP16.68■□□□□ 0.26
LIMS4-204ENST00000632897 POLLQ9UGP5 575 aa16.68■□□□□ 0.26
LIMS4-204ENST00000632897 CNPY2Q9Y2B0 182 aa16.68■□□□□ 0.26
LIMS4-204ENST00000632897 NID2Q14112 1375 aa16.68■□□□□ 0.26
LIMS4-204ENST00000632897 COL11A2P13942 1736 aaPredicted RBP16.68■□□□□ 0.26
LIMS4-204ENST00000632897 KDM4AO75164 1064 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 NT5C2P49902 561 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 KRT85P78386 507 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 SLC51AQ86UW1 340 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 TBC1D22AQ8WUA7 517 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 LY9Q9HBG7 655 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 ZSWIM5Q9P217 1185 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 TACC3Q9Y6A5 838 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 LAMB1P07942 1786 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 CPLX1O14810 134 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 IFIT3O14879 490 aaKnown RBP16.67■□□□□ 0.26
LIMS4-204ENST00000632897 DTNBO60941 627 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 CDKL5O76039 1030 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 FGRP09769 529 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 METAP2P50579 478 aaKnown RBP eCLIP16.67■□□□□ 0.26
LIMS4-204ENST00000632897 RCAN1P53805 252 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 UBE2HP62256 183 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 FOXD4L6Q3SYB3 417 aaPredicted RBP16.67■□□□□ 0.26
LIMS4-204ENST00000632897 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 CPLX2Q6PUV4 134 aaKnown RBP16.67■□□□□ 0.26
LIMS4-204ENST00000632897 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 FOXD4L3Q6VB84 417 aaPredicted RBP16.67■□□□□ 0.26
LIMS4-204ENST00000632897 TMTC2Q8N394 836 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 ESR2Q92731 530 aa16.67■□□□□ 0.26
LIMS4-204ENST00000632897 SYAP1Q96A49 352 aaPredicted RBP16.67■□□□□ 0.26
LIMS4-204ENST00000632897 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.26
LIMS4-204ENST00000632897 ARPP21Q9UBL0 812 aaPredicted RBP16.67■□□□□ 0.26
LIMS4-204ENST00000632897 FAM205AQ6ZU69 1335 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 ERICH2A1L162 156 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 ZBTB43O43298 467 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 BAG3O95817 575 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
LIMS4-204ENST00000632897 ZNF445P59923 1031 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 PPP4CP60510 307 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 DNM1Q05193 864 aaKnown RBP16.66■□□□□ 0.26
LIMS4-204ENST00000632897 RESTQ13127 1097 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
LIMS4-204ENST00000632897 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
LIMS4-204ENST00000632897 GPR101Q96P66 508 aaPredicted RBP16.66■□□□□ 0.26
LIMS4-204ENST00000632897 NOL10Q9BSC4 688 aaKnown RBP16.66■□□□□ 0.26
LIMS4-204ENST00000632897 TMX4Q9H1E5 349 aaPredicted RBP16.66■□□□□ 0.26
LIMS4-204ENST00000632897 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
LIMS4-204ENST00000632897 ELP1O95163 1332 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 CCDC69A6NI79 296 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 RRP12Q5JTH9 1297 aaKnown RBP16.65■□□□□ 0.26
LIMS4-204ENST00000632897 STYK1Q6J9G0 422 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 SYNE3Q6ZMZ3 975 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 SLF2Q8IX21 1173 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 NKX2-3Q8TAU0 364 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 COA1Q9GZY4 146 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 GDPD2Q9HCC8 539 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 INCENPQ9NQS7 918 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
LIMS4-204ENST00000632897 BRCA1P38398 1863 aaKnown RBP16.65■□□□□ 0.26
LIMS4-204ENST00000632897 MROH7-TTC4A0A0A0MT08 1334 aa16.64■□□□□ 0.26
LIMS4-204ENST00000632897 ARFGEF1Q9Y6D6 1849 aa16.64■□□□□ 0.25
LIMS4-204ENST00000632897 WTAPQ15007 396 aa16.64■□□□□ 0.25
LIMS4-204ENST00000632897 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
LIMS4-204ENST00000632897 UBAC1Q9BSL1 405 aa16.64■□□□□ 0.25
LIMS4-204ENST00000632897 SCAND2PQ9GZW5 306 aaPredicted RBP16.64■□□□□ 0.25
LIMS4-204ENST00000632897 SLC12A7Q9Y666 1083 aa16.64■□□□□ 0.25
LIMS4-204ENST00000632897 TCHHQ07283 1943 aa16.64■□□□□ 0.25
LIMS4-204ENST00000632897 GOLGA8AA7E2F4 631 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 USP17L21D6R901 530 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 FIBPO43427 364 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 ORC4O43929 436 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 FDPSP14324 419 aaKnown RBP16.63■□□□□ 0.25
LIMS4-204ENST00000632897 MRE11P49959 708 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 ZSCAN23Q3MJ62 389 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 ATL3Q6DD88 541 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 MPNDQ8N594 471 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 ORC3Q9UBD5 711 aaPredicted RBP16.63■□□□□ 0.25
LIMS4-204ENST00000632897 SUGT1Q9Y2Z0 365 aa16.63■□□□□ 0.25
LIMS4-204ENST00000632897 GOLGB1Q14789 3259 aaKnown RBP16.63■□□□□ 0.25
LIMS4-204ENST00000632897 BAZ2AQ9UIF9 1905 aaKnown RBP16.63■□□□□ 0.25
LIMS4-204ENST00000632897 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-204ENST00000632897 PLCG2P16885 1265 aa16.62■□□□□ 0.25
LIMS4-204ENST00000632897 DPP8Q6V1X1 898 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-204ENST00000632897 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-204ENST00000632897 EYA3Q99504 573 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms