RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 NEK11Q8NG66 645 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 SLC26A6Q9BXS9 759 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 TJP1Q07157 1748 aa21.51■■□□□ 1.03
MECP2-218ENST00000629277 BTBD18B2RXH4 712 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 CASQ1P31415 396 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 IARSP41252 1262 aaKnown RBP21.5■■□□□ 1.03
MECP2-218ENST00000629277 ST5P78524 1137 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 PROSER2Q86WR7 435 aaPredicted RBP21.5■■□□□ 1.03
MECP2-218ENST00000629277 CMTR1Q8N1G2 835 aaKnown RBP21.5■■□□□ 1.03
MECP2-218ENST00000629277 MED15Q96RN5 788 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 ZSWIM4Q9H7M6 989 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 PIH1D3Q9NQM4 214 aaKnown RBP21.5■■□□□ 1.03
MECP2-218ENST00000629277 SEC31BQ9NQW1 1179 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 MAN1B1Q9UKM7 699 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 KCNJ14Q9UNX9 436 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 A0A0U1RQJ8 604 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 ZBTB43O43298 467 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 TBX2Q13207 712 aaPredicted RBP21.5■■□□□ 1.03
MECP2-218ENST00000629277 ATRIPQ8WXE1 791 aa21.5■■□□□ 1.03
MECP2-218ENST00000629277 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.5■■□□□ 1.03
MECP2-218ENST00000629277 FAM237AA0A1B0GTK4 181 aa21.49■■□□□ 1.03
MECP2-218ENST00000629277 CDK11BP21127 795 aaKnown RBP21.49■■□□□ 1.03
MECP2-218ENST00000629277 HNRNPH2P55795 449 aaKnown RBP21.49■■□□□ 1.03
MECP2-218ENST00000629277 IGDCC4Q8TDY8 1250 aa21.49■■□□□ 1.03
MECP2-218ENST00000629277 SAMSN1Q9NSI8 373 aaKnown RBP21.49■■□□□ 1.03
MECP2-218ENST00000629277 C4AP0C0L4 1744 aa21.49■■□□□ 1.03
MECP2-218ENST00000629277 C4BP0C0L5 1744 aa21.49■■□□□ 1.03
MECP2-218ENST00000629277 GOLGA8AA7E2F4 631 aa21.49■■□□□ 1.03
MECP2-218ENST00000629277 POLR2DO15514 142 aaKnown RBP21.49■■□□□ 1.03
MECP2-218ENST00000629277 CUTAO60888 179 aa21.49■■□□□ 1.03
MECP2-218ENST00000629277 ADD2P35612 726 aa21.49■■□□□ 1.03
MECP2-218ENST00000629277 TOB1P50616 345 aaPredicted RBP21.49■■□□□ 1.03
MECP2-218ENST00000629277 IRX5P78411 483 aaPredicted RBP21.49■■□□□ 1.03
MECP2-218ENST00000629277 CC2D1AQ6P1N0 951 aaPredicted RBP21.49■■□□□ 1.03
MECP2-218ENST00000629277 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.49■■□□□ 1.03
MECP2-218ENST00000629277 C1orf167Q5SNV9 1468 aa21.49■■□□□ 1.03
MECP2-218ENST00000629277 ATP2B1P20020 1258 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 GYS2P54840 703 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 MAP3K9P80192 1104 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 PPP2R3AQ06190 1150 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 METTL24Q5JXM2 366 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 KIFC2Q96AC6 838 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 DHX58Q96C10 678 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 SRRTQ9BXP5 876 aaKnown RBP21.48■■□□□ 1.03
MECP2-218ENST00000629277 LY9Q9HBG7 655 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 TMEM51Q9NW97 253 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 SERTAD1Q9UHV2 236 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 CDKL5O76039 1030 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 TRIM29Q14134 588 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 KRI1Q8N9T8 703 aaKnown RBP21.48■■□□□ 1.03
MECP2-218ENST00000629277 TACC3Q9Y6A5 838 aa21.48■■□□□ 1.03
MECP2-218ENST00000629277 CTDSPL2Q05D32 466 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 IFIT5Q13325 482 aaKnown RBP21.47■■□□□ 1.03
MECP2-218ENST00000629277 TMEM67Q5HYA8 995 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 SPECC1LQ69YQ0 1117 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 USP49Q70CQ1 688 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 MRPL44Q9H9J2 332 aaKnown RBP21.47■■□□□ 1.03
MECP2-218ENST00000629277 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 MRFAP1Q9Y605 127 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 ZNF532Q9HCE3 1301 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 POSTNQ15063 836 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 ISCA1Q9BUE6 129 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 PARD6BQ9BYG5 372 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 WDR19Q8NEZ3 1342 aa21.47■■□□□ 1.03
MECP2-218ENST00000629277 OAS2P29728 719 aaKnown RBP21.46■■□□□ 1.03
MECP2-218ENST00000629277 KIF1AQ12756 1690 aa21.46■■□□□ 1.03
MECP2-218ENST00000629277 FCHSD1Q86WN1 690 aa21.46■■□□□ 1.03
MECP2-218ENST00000629277 SMARCE1Q969G3 411 aa21.46■■□□□ 1.03
MECP2-218ENST00000629277 MPHOSPH8Q99549 860 aa21.46■■□□□ 1.03
MECP2-218ENST00000629277 ZKSCAN3Q9BRR0 538 aa21.46■■□□□ 1.03
MECP2-218ENST00000629277 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.46■■□□□ 1.03
MECP2-218ENST00000629277 SOWAHDA6NJG2 315 aa21.46■■□□□ 1.03
MECP2-218ENST00000629277 ZNF18P17022 549 aa21.46■■□□□ 1.03
MECP2-218ENST00000629277 CPLX2Q6PUV4 134 aaKnown RBP21.46■■□□□ 1.03
MECP2-218ENST00000629277 NOSTRINQ8IVI9 506 aa21.46■■□□□ 1.03
MECP2-218ENST00000629277 TEX13AQ9BXU3 409 aaPredicted RBP21.46■■□□□ 1.03
MECP2-218ENST00000629277 NR5A1Q13285 461 aa21.45■■□□□ 1.03
MECP2-218ENST00000629277 TCIRG1Q13488 830 aa21.45■■□□□ 1.03
MECP2-218ENST00000629277 LDHAL6AQ6ZMR3 332 aa21.45■■□□□ 1.03
MECP2-218ENST00000629277 LZTFL1Q9NQ48 299 aa21.45■■□□□ 1.03
MECP2-218ENST00000629277 ZSWIM5Q9P217 1185 aa21.45■■□□□ 1.03
MECP2-218ENST00000629277 SPEF2Q9C093 1822 aa21.45■■□□□ 1.02
MECP2-218ENST00000629277 GREM2Q9H772 168 aa21.45■■□□□ 1.02
MECP2-218ENST00000629277 PCDHB6Q9Y5E3 794 aa21.45■■□□□ 1.02
MECP2-218ENST00000629277 TEX33O43247 280 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 STX10O60499 249 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 GPTP24298 496 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 RSRC2Q7L4I2 434 aaKnown RBP21.44■■□□□ 1.02
MECP2-218ENST00000629277 DIS3L2Q8IYB7 885 aaKnown RBP21.44■■□□□ 1.02
MECP2-218ENST00000629277 CPLX3Q8WVH0 158 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 UBXN6Q9BZV1 441 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 CALCOCO1Q9P1Z2 691 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 FBXO2Q9UK22 296 aaPredicted RBP21.44■■□□□ 1.02
MECP2-218ENST00000629277 CASP1P29466 404 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 SMC1AQ14683 1233 aaKnown RBP21.44■■□□□ 1.02
MECP2-218ENST00000629277 CCDC12Q8WUD4 166 aaPredicted RBP21.44■■□□□ 1.02
MECP2-218ENST00000629277 RIPOR2Q9Y4F9 1068 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 RIC1Q4ADV7 1423 aa21.44■■□□□ 1.02
MECP2-218ENST00000629277 IFIT3O14879 490 aaKnown RBP21.43■■□□□ 1.02
MECP2-218ENST00000629277 TFRCP02786 760 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms