RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-219	ENST00000629151	SBK1	Q52WX2	424 aa		13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	IFNL3	Q8IZI9	196 aa		13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	RBM46	Q8TBY0	533 aa	Known RBP	13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	NAPB	Q9H115	298 aa		13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	PI4KB	Q9UBF8	816 aa		13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	FAM198A	Q9UFP1	575 aa		13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	MKRN1	Q9UHC7	482 aa	Known RBP	13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	ZMYM6	O95789	1325 aa		13.79	□□□□□ -0.2
PTPN7-219	ENST00000629151	SLC3A2	P08195	630 aa	Known RBP	13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	NT5C2	P49902	561 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	NFIA	Q12857	509 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	PICALM	Q13492	652 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	SMC1B	Q8NDV3	1235 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	ZNF287	Q9HBT7	754 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	MCM9	Q9NXL9	1143 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151		U3KPZ7	1027 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	FLT1	P17948	1338 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	COL2A1	P02458	1487 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	MAST2	Q6P0Q8	1798 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	ZNF646	O15015	1829 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	DOCK2	Q92608	1830 aa		13.78	□□□□□ -0.2
PTPN7-219	ENST00000629151	POLR3D	P05423	398 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	TDO2	P48775	406 aa		13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	CACNB3	P54284	484 aa		13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	FSTL1	Q12841	308 aa		13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	ATRNL1	Q5VV63	1379 aa		13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	MAPKAPK5	Q8IW41	473 aa		13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	SDR42E1	Q8WUS8	393 aa		13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	MAP4K1	Q92918	833 aa		13.77	□□□□□ -0.21
PTPN7-219	ENST00000629151	GOLGB1	Q14789	3259 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	ASTN2	O75129	1339 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	PRKAB2	O43741	272 aa		13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	TBC1D12	O60347	775 aa		13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	PC	P11498	1178 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	TCP10	Q12799	353 aa		13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	DCAF15	Q66K64	600 aa		13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	CCDC129	Q6ZRS4	1044 aa		13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	USP48	Q86UV5	1035 aa		13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	EHD4	Q9H223	541 aa		13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	ANO2	Q9NQ90	1003 aa		13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	DDX4	Q9NQI0	724 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	HERC5	Q9UII4	1024 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-219	ENST00000629151	CNTNAP1	P78357	1384 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	USP17L12	C9JPN9	530 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	USP17L21	D6R901	530 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	PPP1R12B	O60237	982 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	FGA	P02671	866 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	MAP3K10	Q02779	954 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	IMMT	Q16891	758 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	C12orf60	Q5U649	245 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	RNF20	Q5VTR2	975 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	MAP1S	Q66K74	1059 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	CTR9	Q6PD62	1173 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	CSRNP1	Q96S65	589 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	TRIM34	Q9BYJ4	488 aa		13.75	□□□□□ -0.21
PTPN7-219	ENST00000629151	UNCX	A6NJT0	531 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	ZNF213	O14771	459 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	POTEI	P0CG38	1075 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	POTEJ	P0CG39	1038 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	FKBP1B	P68106	108 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	VPS53	Q5VIR6	699 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	METTL16	Q86W50	562 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	TEPSIN	Q96N21	525 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	TMEM39B	Q9GZU3	492 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	LSG1	Q9H089	658 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	RNF41	Q9H4P4	317 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	SWAP70	Q9UH65	585 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	SERPINB13	Q9UIV8	391 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	ANAPC4	Q9UJX5	808 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	PALD1	Q9ULE6	856 aa		13.74	□□□□□ -0.21
PTPN7-219	ENST00000629151	ITGBL1	O95965	494 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	MCC	P23508	829 aa		13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	PDE4B	Q07343	736 aa		13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	ZFPM1	Q8IX07	1006 aa		13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	CDCA5	Q96FF9	252 aa		13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	UPF2	Q9HAU5	1272 aa	Known RBP	13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	GINM1	Q9NU53	330 aa		13.73	□□□□□ -0.21
PTPN7-219	ENST00000629151	MYH2	Q9UKX2	1941 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	DDTL	A6NHG4	134 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	MINDY4B	A8MYZ0	360 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	ADM5	C9JUS6	153 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	FOXP2	O15409	715 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	ZKSCAN1	P17029	563 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	PPARA	Q07869	468 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	C8orf34	Q49A92	452 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	SH3BP5L	Q7L8J4	393 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	ZNF341	Q9BYN7	854 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	IL25	Q9H293	177 aa		13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	SAP30BP	Q9UHR5	308 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-219	ENST00000629151	PLCD1	P51178	756 aa		13.71	□□□□□ -0.21
PTPN7-219	ENST00000629151	PTH1R	Q03431	593 aa		13.71	□□□□□ -0.21
PTPN7-219	ENST00000629151	GABPA	Q06546	454 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms