RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 BRWD1Q9NSI6 2320 aa8□□□□□ -1.13
LINC00649-220ENST00000628906 RPAP1Q9BWH6 1393 aaPredicted RBP7.99□□□□□ -1.13
LINC00649-220ENST00000628906 DIAPH1O60610 1272 aaKnown RBP7.99□□□□□ -1.13
LINC00649-220ENST00000628906 XRCC5P13010 732 aaKnown RBP7.99□□□□□ -1.13
LINC00649-220ENST00000628906 SNX17Q15036 470 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 SKIV2LQ15477 1246 aaKnown RBP7.99□□□□□ -1.13
LINC00649-220ENST00000628906 SLC39A5Q6ZMH5 540 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 HFE2Q6ZVN8 426 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 MCM10Q7L590 875 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 COPS6Q7L5N1 327 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 PHACTR3Q96KR7 559 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 CNTNAP3BQ96NU0 1288 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 THUMPD2Q9BTF0 503 aaKnown RBP7.99□□□□□ -1.13
LINC00649-220ENST00000628906 CNTNAP3Q9BZ76 1288 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 PRDM5Q9NQX1 630 aaPredicted RBP7.99□□□□□ -1.13
LINC00649-220ENST00000628906 DACH1Q9UI36 760 aa7.99□□□□□ -1.13
LINC00649-220ENST00000628906 MED19A0JLT2 244 aaPredicted RBP7.98□□□□□ -1.13
LINC00649-220ENST00000628906 GRXCR1A8MXD5 290 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 IRS4O14654 1257 aaPredicted RBP7.98□□□□□ -1.13
LINC00649-220ENST00000628906 CCT4P50991 539 aaKnown RBP7.98□□□□□ -1.13
LINC00649-220ENST00000628906 EIF4A1P60842 406 aaKnown RBP7.98□□□□□ -1.13
LINC00649-220ENST00000628906 FKBP1AP62942 108 aaKnown RBP7.98□□□□□ -1.13
LINC00649-220ENST00000628906 FAM110CQ1W6H9 321 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 PROSER3Q2NL68 480 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 RASIP1Q5U651 963 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 C1orf53Q5VUE5 145 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 FASTKD5Q7L8L6 764 aaKnown RBP7.98□□□□□ -1.13
LINC00649-220ENST00000628906 FAM178BQ8IXR5 827 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 HLA-CQ95604 372 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 PRRX2Q99811 253 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 MIS18AQ9NYP9 233 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 PLXNA1Q9UIW2 1896 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 FAM208BQ5VWN6 2430 aa7.98□□□□□ -1.13
LINC00649-220ENST00000628906 DNM1LO00429 736 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 DCXO43602 365 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 CCND3P30281 292 aaPredicted RBP7.97□□□□□ -1.13
LINC00649-220ENST00000628906 TNNI2P48788 182 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 TCF15Q12870 199 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 CCDC129Q6ZRS4 1044 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 TRMT44Q8IYL2 757 aaKnown RBP7.97□□□□□ -1.13
LINC00649-220ENST00000628906 MICALL1Q8N3F8 863 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 ANKRD13CQ8N6S4 541 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 RTF1Q92541 710 aaKnown RBP7.97□□□□□ -1.13
LINC00649-220ENST00000628906 TDRD3Q9H7E2 651 aaKnown RBP7.97□□□□□ -1.13
LINC00649-220ENST00000628906 MINPP1Q9UNW1 487 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 TACC3Q9Y6A5 838 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 MAST4O15021 2626 aa7.97□□□□□ -1.13
LINC00649-220ENST00000628906 DMXL1Q9Y485 3027 aa7.96□□□□□ -1.13
LINC00649-220ENST00000628906 TCP10L2B9ZVM9 353 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 PROB1E7EW31 1015 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 F8W031 263 aaPredicted RBP7.96□□□□□ -1.14
LINC00649-220ENST00000628906 HTATSF1O43719 755 aaKnown RBP7.96□□□□□ -1.14
LINC00649-220ENST00000628906 INPP5BP32019 993 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 RBM5P52756 815 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00649-220ENST00000628906 FPGSQ05932 587 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 ACAP1Q15027 740 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 IER5LQ5T953 404 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 ANKRD18AQ8IVF6 992 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 SMCR8Q8TEV9 937 aaPredicted RBP7.96□□□□□ -1.14
LINC00649-220ENST00000628906 LPAR1Q92633 364 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 ZNF428Q96B54 188 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 HOOK2Q96ED9 719 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 ISCA1Q9BUE6 129 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 SLC28A3Q9HAS3 691 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 CD209Q9NNX6 404 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 MSRAQ9UJ68 235 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 ZNF112Q9UJU3 913 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 LEMD3Q9Y2U8 911 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 MTCH2Q9Y6C9 303 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 MAP1BP46821 2468 aaKnown RBP7.96□□□□□ -1.14
LINC00649-220ENST00000628906 VPS13AQ96RL7 3174 aa7.96□□□□□ -1.14
LINC00649-220ENST00000628906 USP24Q9UPU5 2620 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 A0A0G2JLL6 359 aaPredicted RBP7.95□□□□□ -1.14
LINC00649-220ENST00000628906 KIAA0355O15063 1070 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 CYP2B6P20813 491 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 TRIM28Q13263 835 aaKnown RBP7.95□□□□□ -1.14
LINC00649-220ENST00000628906 DCTN1Q14203 1278 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 RAB30Q15771 203 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 TRIM60Q495X7 471 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
LINC00649-220ENST00000628906 PRRT2Q7Z6L0 340 aaPredicted RBP7.95□□□□□ -1.14
LINC00649-220ENST00000628906 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.95□□□□□ -1.14
LINC00649-220ENST00000628906 BSDC1Q9NW68 430 aaPredicted RBP7.95□□□□□ -1.14
LINC00649-220ENST00000628906 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 RLFQ13129 1914 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 ATRNL1Q5VV63 1379 aa7.95□□□□□ -1.14
LINC00649-220ENST00000628906 CCDC152Q4G0S7 254 aa7.94□□□□□ -1.14
LINC00649-220ENST00000628906 DCAF15Q66K64 600 aa7.94□□□□□ -1.14
LINC00649-220ENST00000628906 C16orf59Q7L2K0 433 aa7.94□□□□□ -1.14
LINC00649-220ENST00000628906 DZIP1LQ8IYY4 767 aaKnown RBP7.94□□□□□ -1.14
LINC00649-220ENST00000628906 PNISRQ8TF01 805 aaKnown RBP7.94□□□□□ -1.14
LINC00649-220ENST00000628906 ZNF341Q9BYN7 854 aa7.94□□□□□ -1.14
LINC00649-220ENST00000628906 ALG13Q9NP73 1137 aaKnown RBP7.94□□□□□ -1.14
LINC00649-220ENST00000628906 GAKO14976 1311 aa7.94□□□□□ -1.14
LINC00649-220ENST00000628906 ARAP2Q8WZ64 1704 aa7.93□□□□□ -1.14
LINC00649-220ENST00000628906 MSCO60682 206 aa7.93□□□□□ -1.14
LINC00649-220ENST00000628906 ANXA1P04083 346 aa7.93□□□□□ -1.14
LINC00649-220ENST00000628906 HSP90B1P14625 803 aaKnown RBP7.93□□□□□ -1.14
LINC00649-220ENST00000628906 RAG1P15918 1043 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms