RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 KIF4BQ2VIQ3 1234 aa14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 FAM184AQ8NB25 1140 aa14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 ZMYM1Q5SVZ6 1142 aa14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 GPBP1L1Q9HC44 474 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 SCAF8Q9UPN6 1271 aaKnown RBP14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 KIF3AQ9Y496 699 aa14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 NCOA7Q8NI08 942 aa14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 PDRG1Q9NUG6 133 aa14.6□□□□□ -0.07
SYNGAP1-207ENST00000628646 COL9A3Q14050 684 aaPredicted RBP14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 ESR2Q92731 530 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 HACL1Q9UJ83 578 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 EP400Q96L91 3159 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 PATL2C9JE40 543 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 LRRC2Q9BYS8 371 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 M0R2C6 588 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 FOSBP53539 338 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 PTH1RQ03431 593 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 PIBF1Q8WXW3 757 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 CSRNP1Q96S65 589 aa14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.59□□□□□ -0.07
SYNGAP1-207ENST00000628646 CTDSPL2Q05D32 466 aa14.58□□□□□ -0.07
SYNGAP1-207ENST00000628646 IFNL3Q8IZI9 196 aa14.58□□□□□ -0.07
SYNGAP1-207ENST00000628646 NEK1Q96PY6 1258 aa14.58□□□□□ -0.07
SYNGAP1-207ENST00000628646 CHGBP05060 677 aa14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 CHST3Q7LGC8 479 aa14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 SH3RF3Q8TEJ3 882 aaPredicted RBP14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 NSUN4Q96CB9 384 aaKnown RBP14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 NFKBIEO00221 500 aa14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 HSPD1P10809 573 aaKnown RBP14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 CCDC96Q2M329 555 aa14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 ZNF589Q86UQ0 364 aaPredicted RBP14.58□□□□□ -0.08
SYNGAP1-207ENST00000628646 MROH7-TTC4A0A0A0MT08 1334 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 RIC1Q4ADV7 1423 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 IL1R1P14778 569 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 ZSCAN23Q3MJ62 389 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 TMEM67Q5HYA8 995 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 CREB3L3Q68CJ9 461 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 RUFY3Q7L099 469 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 DAGLAQ9Y4D2 1042 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 C10orf71Q711Q0 1435 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 ST3GAL1Q11201 340 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 AGBL3Q8NEM8 1001 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 HOOK2Q96ED9 719 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 KRT23Q9C075 422 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 SUGT1Q9Y2Z0 365 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 GOLGA6L4A6NEF3 574 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 PPP1R12BO60237 982 aaPredicted RBP14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 RAB11FIP4Q86YS3 637 aa14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.57□□□□□ -0.08
SYNGAP1-207ENST00000628646 RPS12P25398 132 aaKnown RBP14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 MIGA2Q7L4E1 593 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 ZNF512BQ96KM6 892 aaPredicted RBP14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 ZKSCAN3Q9BRR0 538 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 MYOZ2Q9NPC6 264 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 FGAP02671 866 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 NECTIN1Q15223 517 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 CCDC82Q8N4S0 544 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 CNNM2Q9H8M5 875 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 PICK1Q9NRD5 415 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 ATP8A2Q9NTI2 1148 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 SMC3Q9UQE7 1217 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 ADCK5Q3MIX3 580 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 VPS53Q5VIR6 699 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 TMEM63CQ9P1W3 806 aa14.56□□□□□ -0.08
SYNGAP1-207ENST00000628646 B4E1Z4 1266 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 HMGB1P09429 215 aaKnown RBP14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 FOXD4L5Q5VV16 416 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 FOXD4L4Q8WXT5 416 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 LARGE1O95461 756 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 MCM5P33992 734 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 ARPP21Q9UBL0 812 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 PRPF40AO75400 957 aaKnown RBP14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 YBX3P16989 372 aaKnown RBP eCLIP14.55□□□□□ -0.081e-7■■■■□ 23.4
SYNGAP1-207ENST00000628646 DCAF15Q66K64 600 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 ZSCAN31Q96LW9 406 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 PPP1R9BQ96SB3 815 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 GGA3Q9NZ52 723 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 KCNA3P22001 575 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 AK2P54819 239 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 PPARAQ07869 468 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 ANKRD1Q15327 319 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 ANGEL2Q5VTE6 544 aaKnown RBP14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 KAT14Q9H8E8 782 aa14.55□□□□□ -0.08
SYNGAP1-207ENST00000628646 H3BQV1 296 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 ZYXQ15942 572 aaKnown RBP14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 SUPT20HL1Q3ZLR7 823 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 DACT2Q5SW24 774 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 IFFO2Q5TF58 517 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 USP48Q86UV5 1035 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 CCDC144CPQ8IYA2 1237 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 STRBPQ96SI9 672 aaKnown RBP14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 RBM27Q9P2N5 1060 aaKnown RBP14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 CPA1P15085 419 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms