RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 SPTY2D1Q68D10 685 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 ADGRA1Q86SQ6 560 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 TTLL6Q8N841 843 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 MIGA1Q8NAN2 632 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 C7orf43Q8WVR3 580 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 STRBPQ96SI9 672 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 EYA3Q99504 573 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 COA1Q9GZY4 146 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 ARMT1Q9H993 441 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 TAF6LQ9Y6J9 622 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
SOX2-OT-244ENST00000627738 MAGEB6P1A0A0J9YX57 407 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 ARHGAP33O14559 1287 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 C21orf2O43822 256 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 FGAP02671 866 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 CASTP20810 708 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 PSMA5P28066 241 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 CC2D2BQ6DHV5 1058 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 TTLL5Q6EMB2 1281 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 LCORLQ8N3X6 602 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 ZNF384Q8TF68 577 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 TM6SF1Q9BZW5 370 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 CTNNA3Q9UI47 895 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.52
SOX2-OT-244ENST00000627738 RPAP1Q9BWH6 1393 aaPredicted RBP11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 APPP05067 770 aa11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 LDHBP07195 334 aaKnown RBP11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 CPA1P15085 419 aa11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 TGFB2P61812 414 aa11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 KRT32Q14532 448 aa11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 GRIK5Q16478 980 aa11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 ADGRD1Q6QNK2 874 aa11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 DZIP1Q86YF9 867 aaKnown RBP11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 RTFDC1Q9BY42 306 aaPredicted RBP11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 CYP46A1Q9Y6A2 500 aa11.82□□□□□ -0.52
SOX2-OT-244ENST00000627738 SNED1Q8TER0 1413 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 PRKAB2O43741 272 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 IGSF3O75054 1194 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 GNAT2P19087 354 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 MCM2P49736 904 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 PSEN2P49810 448 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 GTF2IP78347 998 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 IMMTQ16891 758 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 NOL8Q76FK4 1167 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 RUFY3Q7L099 469 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 IFNL3Q8IZI9 196 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 IL27Q8NEV9 243 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 FBXW7Q969H0 707 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 TTC14Q96N46 770 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 NEK1Q96PY6 1258 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 RIOK1Q9BRS2 568 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 PPP1R1BQ9UD71 204 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 SLC4A4Q9Y6R1 1079 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 MAST2Q6P0Q8 1798 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 FAM205AQ6ZU69 1335 aa11.81□□□□□ -0.52
SOX2-OT-244ENST00000627738 GSG1L2A8MUP6 293 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 ZNF213O14771 459 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 AK2P54819 239 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 HAND2P61296 217 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 COL9A3Q14050 684 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 ALX1Q15699 326 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 MFSD14BQ5SR56 506 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 BLOC1S2Q6QNY1 142 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 ZNF454Q8N9F8 522 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 SUPT20HQ8NEM7 779 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 SLKQ9H2G2 1235 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 DBNDD1Q9H9R9 158 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 EPB41L4AQ9HCS5 686 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 PDRG1Q9NUG6 133 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 AATFQ9NY61 560 aaKnown RBP eCLIP11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 PIM2Q9P1W9 311 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 CCDC88AQ3V6T2 1871 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
SOX2-OT-244ENST00000627738 E7EWF7 191 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 GPR37O15354 613 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 GSTO1P78417 241 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 DIXDC1Q155Q3 683 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 PODNQ7Z5L7 613 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 NACAP1Q9BZK3 213 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 NAPBQ9H115 298 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 CHD4Q14839 1912 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 ZMYM6O95789 1325 aa11.79□□□□□ -0.52
SOX2-OT-244ENST00000627738 ECE2O60344 883 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 LDHCP07864 332 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 HSP90AA1P07900 732 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 TDO2P48775 406 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms