RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 TREML2Q5T2D2 321 aa10.88□□□□□ -0.67
TCF4-258ENST00000627320 LMBR1LQ6UX01 489 aa10.88□□□□□ -0.67
TCF4-258ENST00000627320 MAFAQ8NHW3 353 aaPredicted RBP10.88□□□□□ -0.67
TCF4-258ENST00000627320 TRIB2Q92519 343 aa10.88□□□□□ -0.67
TCF4-258ENST00000627320 GBF1Q92538 1859 aa10.88□□□□□ -0.67
TCF4-258ENST00000627320 PARK7Q99497 189 aaKnown RBP10.88□□□□□ -0.67
TCF4-258ENST00000627320 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
TCF4-258ENST00000627320 C11orf49Q9H6J7 331 aa10.88□□□□□ -0.67
TCF4-258ENST00000627320 REV3LO60673 3130 aa10.88□□□□□ -0.67
TCF4-258ENST00000627320 ATRNL1Q5VV63 1379 aa10.88□□□□□ -0.67
TCF4-258ENST00000627320 NEXNQ0ZGT2 675 aa10.87□□□□□ -0.67
TCF4-258ENST00000627320 DIXDC1Q155Q3 683 aa10.87□□□□□ -0.67
TCF4-258ENST00000627320 TTYH1Q9H313 450 aaPredicted RBP10.87□□□□□ -0.67
TCF4-258ENST00000627320 ZNF112Q9UJU3 913 aa10.87□□□□□ -0.67
TCF4-258ENST00000627320 RPAP1Q9BWH6 1393 aaPredicted RBP10.87□□□□□ -0.67
TCF4-258ENST00000627320 HIBADHP31937 336 aaKnown RBP10.86□□□□□ -0.67
TCF4-258ENST00000627320 IFIT5Q13325 482 aaKnown RBP10.86□□□□□ -0.67
TCF4-258ENST00000627320 IRF5Q13568 498 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 C9orf50Q5SZB4 431 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 CCDC30Q5VVM6 783 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 NBPF3Q9H094 633 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 CNNM1Q9NRU3 951 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 IFT57Q9NWB7 429 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 FAM198AQ9UFP1 575 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 CDK5RAP2Q96SN8 1893 aa10.86□□□□□ -0.67
TCF4-258ENST00000627320 PLXNA1Q9UIW2 1896 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 A0A0G2JLL6 359 aaPredicted RBP10.85□□□□□ -0.67
TCF4-258ENST00000627320 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 APAF1O14727 1248 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 CCND3P30281 292 aaPredicted RBP10.85□□□□□ -0.67
TCF4-258ENST00000627320 LRRC24Q50LG9 513 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 LDHAL6AQ6ZMR3 332 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 SH3BP5LQ7L8J4 393 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 PRRT2Q7Z6L0 340 aaPredicted RBP10.85□□□□□ -0.67
TCF4-258ENST00000627320 TEKT1Q969V4 418 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 ZDHHC15Q96MV8 337 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 ZHX2Q9Y6X8 837 aa10.85□□□□□ -0.67
TCF4-258ENST00000627320 TRIM75PA6NK02 468 aa10.84□□□□□ -0.67
TCF4-258ENST00000627320 PHF20L1A8MW92 1017 aa10.84□□□□□ -0.67
TCF4-258ENST00000627320 FLIIQ13045 1269 aa10.84□□□□□ -0.67
TCF4-258ENST00000627320 NOL9Q5SY16 702 aaKnown RBP10.84□□□□□ -0.67
TCF4-258ENST00000627320 ZNF697Q5TEC3 545 aa10.84□□□□□ -0.67
TCF4-258ENST00000627320 DCAF15Q66K64 600 aa10.84□□□□□ -0.67
TCF4-258ENST00000627320 CDC42EP5Q6NZY7 148 aa10.84□□□□□ -0.67
TCF4-258ENST00000627320 FAM83AQ86UY5 434 aa10.84□□□□□ -0.67
TCF4-258ENST00000627320 KLHDC4Q8TBB5 520 aa10.84□□□□□ -0.67
TCF4-258ENST00000627320 HMGCRP04035 888 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 COL6A1P12109 1028 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 PTPRAP18433 802 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 CYP2B6P20813 491 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 GNAI1P63096 354 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 SHHQ15465 462 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 CCL14Q16627 93 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 FAM151AQ8WW52 585 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 DNAAF4Q8WXU2 420 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 KAZALD1Q96I82 304 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 GJD2Q9UKL4 321 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 OGDHLQ9ULD0 1010 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 DAGLAQ9Y4D2 1042 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 AFG3L2Q9Y4W6 797 aa10.83□□□□□ -0.68
TCF4-258ENST00000627320 MYO9BQ13459 2157 aa10.82□□□□□ -0.68
TCF4-258ENST00000627320 TMEM265A0A087WTH1 108 aa10.82□□□□□ -0.68
TCF4-258ENST00000627320 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
TCF4-258ENST00000627320 ATN1P54259 1190 aaPredicted RBP10.82□□□□□ -0.68
TCF4-258ENST00000627320 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
TCF4-258ENST00000627320 TAF7LQ5H9L4 462 aa10.82□□□□□ -0.68
TCF4-258ENST00000627320 FBXO33Q7Z6M2 555 aa10.82□□□□□ -0.68
TCF4-258ENST00000627320 SMCR8Q8TEV9 937 aaPredicted RBP10.82□□□□□ -0.68
TCF4-258ENST00000627320 SUCLG2Q96I99 432 aa10.82□□□□□ -0.68
TCF4-258ENST00000627320 SEMA6BQ9H3T3 888 aa10.82□□□□□ -0.68
TCF4-258ENST00000627320 TMOD2Q9NZR1 351 aa10.82□□□□□ -0.68
TCF4-258ENST00000627320 MYO5AQ9Y4I1 1855 aaKnown RBP10.82□□□□□ -0.68
TCF4-258ENST00000627320 DDTLA6NHG4 134 aaPredicted RBP10.81□□□□□ -0.68
TCF4-258ENST00000627320 PRDX5P30044 214 aa10.81□□□□□ -0.68
TCF4-258ENST00000627320 RRP1BQ14684 758 aaKnown RBP10.81□□□□□ -0.68
TCF4-258ENST00000627320 WDR43Q15061 677 aaKnown RBP eCLIP10.81□□□□□ -0.68
TCF4-258ENST00000627320 SHROOM1Q2M3G4 852 aaPredicted RBP10.81□□□□□ -0.68
TCF4-258ENST00000627320 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
TCF4-258ENST00000627320 SCYL3Q8IZE3 742 aa10.81□□□□□ -0.68
TCF4-258ENST00000627320 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
TCF4-258ENST00000627320 LINS1Q8NG48 757 aa10.81□□□□□ -0.68
TCF4-258ENST00000627320 HMX1Q9NP08 348 aaPredicted RBP10.81□□□□□ -0.68
TCF4-258ENST00000627320 DDX4Q9NQI0 724 aaKnown RBP10.81□□□□□ -0.68
TCF4-258ENST00000627320 BDP1A6H8Y1 2624 aa10.81□□□□□ -0.68
TCF4-258ENST00000627320 RFX7Q2KHR2 1363 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 CXCL11O14625 94 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 FOSL2P15408 326 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 PLA2G5P39877 138 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 CACNB2Q08289 660 aaPredicted RBP10.8□□□□□ -0.68
TCF4-258ENST00000627320 UBE4AQ14139 1066 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 CCDC57Q2TAC2 916 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 TWISTNBQ3B726 338 aaPredicted RBP10.8□□□□□ -0.68
TCF4-258ENST00000627320 BEND3Q5T5X7 828 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 LHX8Q68G74 356 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 FAM109BQ6ICB4 259 aaPredicted RBP10.8□□□□□ -0.68
TCF4-258ENST00000627320 VGLL2Q8N8G2 317 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 COA7Q96BR5 231 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 STK31Q9BXU1 1019 aa10.8□□□□□ -0.68
TCF4-258ENST00000627320 TXNRD2Q9NNW7 524 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms