RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 CEP290O15078 2479 aa20.47■□□□□ 0.87
TRIM29-221ENST00000627238 NPM3O75607 178 aaKnown RBP20.47■□□□□ 0.87
TRIM29-221ENST00000627238 OSBPP22059 807 aa20.47■□□□□ 0.87
TRIM29-221ENST00000627238 ADORA1P30542 326 aa20.47■□□□□ 0.87
TRIM29-221ENST00000627238 RGS3P49796 1198 aa20.47■□□□□ 0.87
TRIM29-221ENST00000627238 SH3BP5LQ7L8J4 393 aa20.47■□□□□ 0.87
TRIM29-221ENST00000627238 MEIS3Q99687 375 aa20.47■□□□□ 0.87
TRIM29-221ENST00000627238 PTPRAP18433 802 aa20.46■□□□□ 0.87
TRIM29-221ENST00000627238 FASTKD5Q7L8L6 764 aaKnown RBP20.46■□□□□ 0.87
TRIM29-221ENST00000627238 AFG3L2Q9Y4W6 797 aa20.46■□□□□ 0.87
TRIM29-221ENST00000627238 GRK4P32298 578 aa20.45■□□□□ 0.86
TRIM29-221ENST00000627238 RARSP54136 660 aaKnown RBP20.45■□□□□ 0.86
TRIM29-221ENST00000627238 SPTY2D1Q68D10 685 aaPredicted RBP20.45■□□□□ 0.86
TRIM29-221ENST00000627238 NKX2-3Q8TAU0 364 aa20.45■□□□□ 0.86
TRIM29-221ENST00000627238 SHISA4Q96DD7 197 aa20.45■□□□□ 0.86
TRIM29-221ENST00000627238 AKAP2Q9Y2D5 859 aa20.45■□□□□ 0.86
TRIM29-221ENST00000627238 RANBP2P49792 3224 aaKnown RBP20.45■□□□□ 0.86
TRIM29-221ENST00000627238 COL2A1P02458 1487 aaPredicted RBP20.44■□□□□ 0.86
TRIM29-221ENST00000627238 CTNND1O60716 968 aaKnown RBP20.44■□□□□ 0.86
TRIM29-221ENST00000627238 MAP4K4O95819 1239 aaPredicted RBP20.44■□□□□ 0.86
TRIM29-221ENST00000627238 GNAI3P08754 354 aa20.44■□□□□ 0.86
TRIM29-221ENST00000627238 TIMM10P62072 90 aa20.44■□□□□ 0.86
TRIM29-221ENST00000627238 DZIP1Q86YF9 867 aaKnown RBP20.44■□□□□ 0.86
TRIM29-221ENST00000627238 PICK1Q9NRD5 415 aa20.44■□□□□ 0.86
TRIM29-221ENST00000627238 MROH7-TTC4A0A0A0MT08 1334 aa20.44■□□□□ 0.86
TRIM29-221ENST00000627238 MYPNQ86TC9 1320 aa20.44■□□□□ 0.86
TRIM29-221ENST00000627238 GPR75-ASB3A0A0A6YYF3 556 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 A0A1B0GUL7 405 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 DDTLA6NHG4 134 aaPredicted RBP20.43■□□□□ 0.86
TRIM29-221ENST00000627238 TBC1D12O60347 775 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 FMNL1O95466 1100 aaPredicted RBP20.43■□□□□ 0.86
TRIM29-221ENST00000627238 FXR1P51114 621 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRIM29-221ENST00000627238 MVPQ14764 893 aaKnown RBP20.43■□□□□ 0.86
TRIM29-221ENST00000627238 MTFR1Q15390 333 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 UBE2Q1Q7Z7E8 422 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 RAET1EQ8TD07 263 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 XAGE2Q96GT9 111 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 DDX4Q9NQI0 724 aaKnown RBP20.43■□□□□ 0.86
TRIM29-221ENST00000627238 ZHX2Q9Y6X8 837 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 SZT2Q5T011 3432 aa20.43■□□□□ 0.86
TRIM29-221ENST00000627238 GJB1P08034 283 aa20.42■□□□□ 0.86
TRIM29-221ENST00000627238 CYP2C8P10632 490 aa20.42■□□□□ 0.86
TRIM29-221ENST00000627238 BTDP43251 543 aa20.42■□□□□ 0.86
TRIM29-221ENST00000627238 GJA8P48165 433 aa20.42■□□□□ 0.86
TRIM29-221ENST00000627238 FCGRTP55899 365 aa20.42■□□□□ 0.86
TRIM29-221ENST00000627238 RHBDL3P58872 404 aa20.42■□□□□ 0.86
TRIM29-221ENST00000627238 ZNF384Q8TF68 577 aa20.42■□□□□ 0.86
TRIM29-221ENST00000627238 ABCF2Q9UG63 623 aa20.42■□□□□ 0.86
TRIM29-221ENST00000627238 SRGAP3O43295 1099 aa20.41■□□□□ 0.86
TRIM29-221ENST00000627238 CAPN2P17655 700 aa20.41■□□□□ 0.86
TRIM29-221ENST00000627238 TFCP2Q12800 502 aa20.41■□□□□ 0.86
TRIM29-221ENST00000627238 SLAIN1Q8ND83 568 aa20.41■□□□□ 0.86
TRIM29-221ENST00000627238 MYCP01106 439 aaPredicted RBP20.4■□□□□ 0.86
TRIM29-221ENST00000627238 MECOMQ03112 1051 aa20.4■□□□□ 0.86
TRIM29-221ENST00000627238 PRKCZQ05513 592 aa20.4■□□□□ 0.86
TRIM29-221ENST00000627238 ERICH6Q7L0X2 663 aa20.4■□□□□ 0.86
TRIM29-221ENST00000627238 ZSCAN29Q8IWY8 852 aaPredicted RBP20.4■□□□□ 0.86
TRIM29-221ENST00000627238 COLQQ9Y215 455 aaPredicted RBP20.4■□□□□ 0.86
TRIM29-221ENST00000627238 LOC285556D6RIA3 1793 aa20.39■□□□□ 0.86
TRIM29-221ENST00000627238 ARID4AP29374 1257 aaPredicted RBP20.39■□□□□ 0.85
TRIM29-221ENST00000627238 UBXN2AP68543 259 aa20.39■□□□□ 0.85
TRIM29-221ENST00000627238 PXYLP1Q8TE99 480 aa20.39■□□□□ 0.85
TRIM29-221ENST00000627238 HMG20BQ9P0W2 317 aa20.39■□□□□ 0.85
TRIM29-221ENST00000627238 H0YGN5 161 aa20.38■□□□□ 0.85
TRIM29-221ENST00000627238 CCL5P13501 91 aa20.38■□□□□ 0.85
TRIM29-221ENST00000627238 IRF5Q13568 498 aa20.38■□□□□ 0.85
TRIM29-221ENST00000627238 NSUN4Q96CB9 384 aaKnown RBP20.38■□□□□ 0.85
TRIM29-221ENST00000627238 TBC1D2Q9BYX2 928 aa20.38■□□□□ 0.85
TRIM29-221ENST00000627238 AGTPBP1Q9UPW5 1226 aa20.38■□□□□ 0.85
TRIM29-221ENST00000627238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.38■□□□□ 0.85
TRIM29-221ENST00000627238 GSTO1P78417 241 aa20.37■□□□□ 0.85
TRIM29-221ENST00000627238 GADL1Q6ZQY3 521 aa20.37■□□□□ 0.85
TRIM29-221ENST00000627238 SPATA5Q8NB90 893 aa20.37■□□□□ 0.85
TRIM29-221ENST00000627238 PROCA1Q8NCQ7 364 aaPredicted RBP20.37■□□□□ 0.85
TRIM29-221ENST00000627238 OSBPL5Q9H0X9 879 aaPredicted RBP20.37■□□□□ 0.85
TRIM29-221ENST00000627238 GABRQQ9UN88 632 aa20.37■□□□□ 0.85
TRIM29-221ENST00000627238 TRIOBPQ9H2D6 2365 aa20.36■□□□□ 0.85
TRIM29-221ENST00000627238 CCER2I3L3R5 266 aa20.36■□□□□ 0.85
TRIM29-221ENST00000627238 LDHCP07864 332 aa20.36■□□□□ 0.85
TRIM29-221ENST00000627238 PICALMQ13492 652 aa20.36■□□□□ 0.85
TRIM29-221ENST00000627238 RNF208Q9H0X6 261 aa20.36■□□□□ 0.85
TRIM29-221ENST00000627238 ATAD5Q96QE3 1844 aa20.36■□□□□ 0.85
TRIM29-221ENST00000627238 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
TRIM29-221ENST00000627238 ECM2O94769 699 aaPredicted RBP20.35■□□□□ 0.85
TRIM29-221ENST00000627238 SLURP2P0DP57 97 aa20.35■□□□□ 0.85
TRIM29-221ENST00000627238 PNMA3Q9UL41 463 aa20.35■□□□□ 0.85
TRIM29-221ENST00000627238 MAST2Q6P0Q8 1798 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 TRIM75PA6NK02 468 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 ADCY3O60266 1144 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 IGSF3O75054 1194 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 GNAI2P04899 355 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 TRIM27P14373 513 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 FLT3LGP49771 235 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 FAM110CQ1W6H9 321 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 SMCR8Q8TEV9 937 aaPredicted RBP20.34■□□□□ 0.85
TRIM29-221ENST00000627238 U2AF1L4Q8WU68 220 aaKnown RBP20.34■□□□□ 0.85
TRIM29-221ENST00000627238 HTATIP2Q9BUP3 242 aa20.34■□□□□ 0.85
TRIM29-221ENST00000627238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.34■□□□□ 0.85
TRIM29-221ENST00000627238 SGPL1O95470 568 aa20.33■□□□□ 0.85
TRIM29-221ENST00000627238 PI16Q6UXB8 463 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms