RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 NBPF3Q9H094 633 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
LINC00963-220ENST00000625171 AATFQ9NY61 560 aaKnown RBP eCLIP13.94□□□□□ -0.186e-8■■■■□ 19.9
LINC00963-220ENST00000625171 ZNF219Q9P2Y4 722 aaPredicted RBP13.94□□□□□ -0.18
LINC00963-220ENST00000625171 ARPP21Q9UBL0 812 aaPredicted RBP13.94□□□□□ -0.18
LINC00963-220ENST00000625171 HSPA1AP0DMV8 641 aaKnown RBP13.93□□□□□ -0.18
LINC00963-220ENST00000625171 HSPA1BP0DMV9 641 aaKnown RBP13.93□□□□□ -0.18
LINC00963-220ENST00000625171 MCM5P33992 734 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 TDO2P48775 406 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 AK2P54819 239 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 TRDNQ13061 729 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 DIXDC1Q155Q3 683 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 MB21D2Q8IYB1 491 aaPredicted RBP13.93□□□□□ -0.18
LINC00963-220ENST00000625171 TEKT1Q969V4 418 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 TMX3Q96JJ7 454 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 KRT23Q9C075 422 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
LINC00963-220ENST00000625171 JAG2Q9Y219 1238 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 DAGLAQ9Y4D2 1042 aa13.93□□□□□ -0.18
LINC00963-220ENST00000625171 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
LINC00963-220ENST00000625171 BTDP43251 543 aa13.92□□□□□ -0.18
LINC00963-220ENST00000625171 PPARAQ07869 468 aa13.92□□□□□ -0.18
LINC00963-220ENST00000625171 APOBEC3HQ6NTF7 200 aaKnown RBP13.92□□□□□ -0.18
LINC00963-220ENST00000625171 RSBN1LQ6PCB5 846 aaPredicted RBP13.92□□□□□ -0.18
LINC00963-220ENST00000625171 NIM1KQ8IY84 436 aa13.92□□□□□ -0.18
LINC00963-220ENST00000625171 MTMR14Q8NCE2 650 aa13.92□□□□□ -0.18
LINC00963-220ENST00000625171 SDR42E1Q8WUS8 393 aa13.92□□□□□ -0.18
LINC00963-220ENST00000625171 KCNQ5Q9NR82 932 aa13.92□□□□□ -0.18
LINC00963-220ENST00000625171 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
LINC00963-220ENST00000625171 ZNF646O15015 1829 aaPredicted RBP13.92□□□□□ -0.18
LINC00963-220ENST00000625171 PSME4Q14997 1843 aa13.92□□□□□ -0.18
LINC00963-220ENST00000625171 ORC4O43929 436 aa13.91□□□□□ -0.18
LINC00963-220ENST00000625171 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
LINC00963-220ENST00000625171 C12orf60Q5U649 245 aa13.91□□□□□ -0.18
LINC00963-220ENST00000625171 MFSD6Q6ZSS7 791 aa13.91□□□□□ -0.18
LINC00963-220ENST00000625171 SH3RF3Q8TEJ3 882 aaPredicted RBP13.91□□□□□ -0.18
LINC00963-220ENST00000625171 JDP2Q8WYK2 163 aa13.91□□□□□ -0.18
LINC00963-220ENST00000625171 ZNF274Q96GC6 653 aaPredicted RBP13.91□□□□□ -0.18
LINC00963-220ENST00000625171 TMEM87BQ96K49 555 aa13.91□□□□□ -0.18
LINC00963-220ENST00000625171 IDI2Q9BXS1 227 aa13.91□□□□□ -0.18
LINC00963-220ENST00000625171 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
LINC00963-220ENST00000625171 ROBO3Q96MS0 1386 aa13.91□□□□□ -0.18
LINC00963-220ENST00000625171 SCN9AQ15858 1988 aa13.91□□□□□ -0.18
LINC00963-220ENST00000625171 TIAM2Q8IVF5 1701 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 LAMA4Q16363 1823 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 MYH2Q9UKX2 1941 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 USP17L12C9JPN9 530 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 USP17L21D6R901 530 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 FZD9O00144 591 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 SLC3A2P08195 630 aaKnown RBP13.9□□□□□ -0.18
LINC00963-220ENST00000625171 RPS12P25398 132 aaKnown RBP13.9□□□□□ -0.18
LINC00963-220ENST00000625171 LIFRP42702 1097 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 CRKP46108 304 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 SLC4A3P48751 1232 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 RASSF7Q02833 373 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 TNIP1Q15025 636 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 RALYLQ86SE5 291 aaKnown RBP13.9□□□□□ -0.18
LINC00963-220ENST00000625171 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
LINC00963-220ENST00000625171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.9□□□□□ -0.182e-8■■■■■ 48.5
LINC00963-220ENST00000625171 HAND2P61296 217 aa13.89□□□□□ -0.19
LINC00963-220ENST00000625171 CXCL9Q07325 125 aa13.89□□□□□ -0.19
LINC00963-220ENST00000625171 FKBP1CQ5VVH2 108 aa13.89□□□□□ -0.19
LINC00963-220ENST00000625171 AMOTL1Q8IY63 956 aa13.89□□□□□ -0.19
LINC00963-220ENST00000625171 DICER1Q9UPY3 1922 aaKnown RBP13.89□□□□□ -0.19
LINC00963-220ENST00000625171 COL4A5P29400 1685 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 PSMD14O00487 310 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 WDHD1O75717 1129 aaPredicted RBP13.88□□□□□ -0.19
LINC00963-220ENST00000625171 CPA1P15085 419 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 USP5P45974 858 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 RCAN1P53805 252 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 ANTXR2P58335 489 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 COL9A3Q14050 684 aaPredicted RBP13.88□□□□□ -0.19
LINC00963-220ENST00000625171 CIAPIN1Q6FI81 312 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 DPY19L2Q6NUT2 758 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 Q6ZUG5 572 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 SGMS1Q86VZ5 419 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 TEX11Q8IYF3 940 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 IGDCC4Q8TDY8 1250 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 ESR2Q92731 530 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 DPF2Q92785 391 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 ZNF287Q9HBT7 754 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 ZSWIM5Q9P217 1185 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 HDAC9Q9UKV0 1011 aa13.88□□□□□ -0.19
LINC00963-220ENST00000625171 PRC1O43663 620 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 PDE4BQ07343 736 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 CDC42EP5Q6NZY7 148 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 TTC6Q86TZ1 520 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 KIAA0825Q8IV33 1275 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 TGFBRAP1Q8WUH2 860 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 ZBED3Q96IU2 234 aaPredicted RBP13.87□□□□□ -0.19
LINC00963-220ENST00000625171 MXD3Q9BW11 206 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 DHX36Q9H2U1 1008 aaKnown RBP13.87□□□□□ -0.19
LINC00963-220ENST00000625171 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 CHMP5Q9NZZ3 219 aa13.87□□□□□ -0.19
LINC00963-220ENST00000625171 TPCN1Q9ULQ1 816 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms