RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 AOX1Q06278 1338 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 TCP10L2B9ZVM9 353 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 GOLIM4O00461 696 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 LDHCP07864 332 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 ATP5JP18859 108 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 NF2P35240 595 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 CACNB3P54284 484 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 TTF1Q15361 905 aaPredicted RBP11.62□□□□□ -0.55
LINC01560-202ENST00000624822 PRAMEF18Q5VWM3 479 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 TSHZ3Q63HK5 1081 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
LINC01560-202ENST00000624822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC01560-202ENST00000624822 NSUN4Q96CB9 384 aaKnown RBP11.62□□□□□ -0.55
LINC01560-202ENST00000624822 CDCA5Q96FF9 252 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 KRTAP3-3Q9BYR6 98 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 KRTAP3-2Q9BYR7 98 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 ANTXR1Q9H6X2 564 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 PIH1D3Q9NQM4 214 aaKnown RBP11.62□□□□□ -0.55
LINC01560-202ENST00000624822 ECHDC1Q9NTX5 307 aa11.62□□□□□ -0.55
LINC01560-202ENST00000624822 ABT1Q9ULW3 272 aaKnown RBP11.62□□□□□ -0.55
LINC01560-202ENST00000624822 MYH1P12882 1939 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 BTDP43251 543 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 MAP3K12Q12852 859 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 TTLL12Q14166 644 aaPredicted RBP11.61□□□□□ -0.55
LINC01560-202ENST00000624822 APOBEC3HQ6NTF7 200 aaKnown RBP11.61□□□□□ -0.55
LINC01560-202ENST00000624822 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
LINC01560-202ENST00000624822 SMC5Q8IY18 1101 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 LNPKQ9C0E8 428 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 DEFB129Q9H1M3 183 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 USP40Q9NVE5 1235 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 PAG1Q9NWQ8 432 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 PAPPA2Q9BXP8 1791 aa11.61□□□□□ -0.55
LINC01560-202ENST00000624822 ERC2O15083 957 aa11.6□□□□□ -0.55
LINC01560-202ENST00000624822 MX1P20591 662 aa11.6□□□□□ -0.55
LINC01560-202ENST00000624822 MAGEB6Q8N7X4 407 aa11.6□□□□□ -0.55
LINC01560-202ENST00000624822 C2orf69Q8N8R5 385 aa11.6□□□□□ -0.55
LINC01560-202ENST00000624822 OTUD7AQ8TE49 926 aaPredicted RBP11.6□□□□□ -0.55
LINC01560-202ENST00000624822 EDC3Q96F86 508 aaKnown RBP11.6□□□□□ -0.55
LINC01560-202ENST00000624822 PPP2R3BQ9Y5P8 575 aa11.6□□□□□ -0.55
LINC01560-202ENST00000624822 GAKO14976 1311 aa11.6□□□□□ -0.55
LINC01560-202ENST00000624822 TTC41PQ6P2S7 1318 aa11.6□□□□□ -0.55
LINC01560-202ENST00000624822 OTOFQ9HC10 1997 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 NAV1Q8NEY1 1877 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
LINC01560-202ENST00000624822 CYP7A1P22680 504 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 PICALMQ13492 652 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 PRKG1Q13976 671 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 RASA3Q14644 834 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 CST9Q5W186 159 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 ZNF384Q8TF68 577 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 HAUS7Q99871 368 aa11.59□□□□□ -0.55
LINC01560-202ENST00000624822 GBA2Q9HCG7 927 aaPredicted RBP11.59□□□□□ -0.55
LINC01560-202ENST00000624822 AATFQ9NY61 560 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01560-202ENST00000624822 BAG3O95817 575 aa11.58□□□□□ -0.56
LINC01560-202ENST00000624822 TCP10Q12799 353 aa11.58□□□□□ -0.56
LINC01560-202ENST00000624822 GRM1Q13255 1194 aa11.58□□□□□ -0.56
LINC01560-202ENST00000624822 SLC9C2Q5TAH2 1124 aa11.58□□□□□ -0.56
LINC01560-202ENST00000624822 ZNF710Q8N1W2 664 aa11.58□□□□□ -0.56
LINC01560-202ENST00000624822 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.58□□□□□ -0.56
LINC01560-202ENST00000624822 TMEM39BQ9GZU3 492 aa11.58□□□□□ -0.56
LINC01560-202ENST00000624822 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.58□□□□□ -0.56
LINC01560-202ENST00000624822 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
LINC01560-202ENST00000624822 MYH8P13535 1937 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 GPR75-ASB3A0A0A6YYF3 556 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 IGSF3O75054 1194 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
LINC01560-202ENST00000624822 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
LINC01560-202ENST00000624822 HUNKP57058 714 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 NUCB1Q02818 461 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 SUPT20HL1Q3ZLR7 823 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 NBPF12Q5TAG4 269 aaPredicted RBP11.57□□□□□ -0.56
LINC01560-202ENST00000624822 ADGRA1Q86SQ6 560 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 TEX11Q8IYF3 940 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 MIGA1Q8NAN2 632 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 TLL2Q9Y6L7 1015 aa11.57□□□□□ -0.56
LINC01560-202ENST00000624822 BAZ2AQ9UIF9 1905 aaKnown RBP11.56□□□□□ -0.56
LINC01560-202ENST00000624822 CNTNAP1P78357 1384 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 ATAD5Q96QE3 1844 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 PDE6AP16499 860 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 RGS3P49796 1198 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 PDE1AP54750 535 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 DYNLL1P63167 89 aaKnown RBP11.56□□□□□ -0.56
LINC01560-202ENST00000624822 NFIAQ12857 509 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 DEFB115Q30KQ5 88 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 FKBP1CQ5VVH2 108 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 ZSCAN25Q6NSZ9 544 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 FAM83AQ86UY5 434 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 ZSCAN29Q8IWY8 852 aaPredicted RBP11.56□□□□□ -0.56
LINC01560-202ENST00000624822 PI4K2BQ8TCG2 481 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 SH3RF3Q8TEJ3 882 aaPredicted RBP11.56□□□□□ -0.56
LINC01560-202ENST00000624822 FAM151AQ8WW52 585 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 ANGEL1Q9UNK9 670 aaKnown RBP11.56□□□□□ -0.56
LINC01560-202ENST00000624822 FZD1Q9UP38 647 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 SALL3Q9BXA9 1300 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 ZNF532Q9HCE3 1301 aa11.56□□□□□ -0.56
LINC01560-202ENST00000624822 SSC5DA1L4H1 1573 aa11.55□□□□□ -0.56
LINC01560-202ENST00000624822 PPP1R12BO60237 982 aaPredicted RBP11.55□□□□□ -0.56
LINC01560-202ENST00000624822 FKBP1BP68106 108 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms