RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SOWAHDA6NJG2 315 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 POTEB2H3BUK9 544 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 N4BP1O75113 896 aaKnown RBP16.14■□□□□ 0.17
LDB3-209ENST00000623056 CASP7P55210 303 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 KRT40Q6A162 431 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 MSANTD4Q8NCY6 345 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 ZBTB9Q96C00 473 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 CDC23Q9UJX2 597 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 MAN1B1Q9UKM7 699 aa16.14■□□□□ 0.17
LDB3-209ENST00000623056 ATF3P18847 181 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
LDB3-209ENST00000623056 CEP112Q8N8E3 955 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 TAOK2Q9UL54 1235 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 ERLIN1O75477 346 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 EIF3JO75822 258 aaKnown RBP16.13■□□□□ 0.17
LDB3-209ENST00000623056 FGAP02671 866 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 DDX60Q8IY21 1712 aaKnown RBP16.13■□□□□ 0.17
LDB3-209ENST00000623056 TRMT44Q8IYL2 757 aaKnown RBP16.13■□□□□ 0.17
LDB3-209ENST00000623056 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
LDB3-209ENST00000623056 RGS22Q8NE09 1264 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 NCOA7Q8NI08 942 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 ABCB6Q9NP58 842 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 GPR108Q9NPR9 543 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 L1RE1Q9UN81 338 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 FAN1Q9Y2M0 1017 aa16.13■□□□□ 0.17
LDB3-209ENST00000623056 A0A0U1RQJ8 604 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 RPS6KA5O75582 802 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 RALYLQ86SE5 291 aaKnown RBP16.12■□□□□ 0.17
LDB3-209ENST00000623056 ENOX1Q8TC92 643 aaKnown RBP16.12■□□□□ 0.17
LDB3-209ENST00000623056 ATRIPQ8WXE1 791 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 SUGCTQ9HAC7 445 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.12■□□□□ 0.17
LDB3-209ENST00000623056 ADGRG1Q9Y653 693 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 PHRF1Q9P1Y6 1649 aaKnown RBP16.12■□□□□ 0.17
LDB3-209ENST00000623056 GCP02774 474 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 FOXR1Q6PIV2 292 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 RAD9BQ6WBX8 426 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 PANX2Q96RD6 677 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.12■□□□□ 0.17
LDB3-209ENST00000623056 TEX13AQ9BXU3 409 aaPredicted RBP16.12■□□□□ 0.17
LDB3-209ENST00000623056 ZMYM6O95789 1325 aa16.12■□□□□ 0.17
LDB3-209ENST00000623056 MST1RQ04912 1400 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 ADAMTS7Q9UKP4 1686 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 AKR1B15C9JRZ8 316 aaPredicted RBP16.11■□□□□ 0.17
LDB3-209ENST00000623056 KIF5CO60282 957 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 FOXO4P98177 505 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 NR1I3Q14994 352 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 WASHC4Q2M389 1173 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 CPDO75976 1380 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 POSTNQ15063 836 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 SPECC1Q5M775 1068 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 TTC39AQ5SRH9 613 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 CERS3Q8IU89 383 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 ELOA2Q8IYF1 753 aaPredicted RBP16.11■□□□□ 0.17
LDB3-209ENST00000623056 MLKLQ8NB16 471 aa16.11■□□□□ 0.17
LDB3-209ENST00000623056 SAMSN1Q9NSI8 373 aaKnown RBP16.11■□□□□ 0.17
LDB3-209ENST00000623056 HOOK1Q9UJC3 728 aaKnown RBP16.11■□□□□ 0.17
LDB3-209ENST00000623056 SPEF2Q9C093 1822 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 PRR29P0C7W0 189 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 IL15P40933 162 aaPredicted RBP16.1■□□□□ 0.17
LDB3-209ENST00000623056 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 ARHGEF25Q86VW2 580 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 NUTM2AQ8IVF1 878 aaPredicted RBP16.1■□□□□ 0.17
LDB3-209ENST00000623056 GOLGA6L1Q8N7Z2 621 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 MED15Q96RN5 788 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 TRPM3Q9HCF6 1732 aaPredicted RBP16.1■□□□□ 0.17
LDB3-209ENST00000623056 A0A1B0GTH6 734 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 A0A1B0GUL7 405 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 FKBP4Q02790 459 aaKnown RBP eCLIP16.1■□□□□ 0.17
LDB3-209ENST00000623056 MORC3Q14149 939 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
LDB3-209ENST00000623056 ZNF569Q5MCW4 686 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
LDB3-209ENST00000623056 PHKBQ93100 1093 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 ZNF496Q96IT1 587 aaPredicted RBP16.1■□□□□ 0.17
LDB3-209ENST00000623056 SLC52A2Q9HAB3 445 aa16.1■□□□□ 0.17
LDB3-209ENST00000623056 RHOXF2BP0C7M4 288 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 RXRAP19793 462 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.17
LDB3-209ENST00000623056 VSNL1P62760 191 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 CASP8Q14790 479 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 KIF4BQ2VIQ3 1234 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 LRRC24Q50LG9 513 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 NT5DC1Q5TFE4 455 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 RHOXF2Q9BQY4 288 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 AKAP2Q9Y2D5 859 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 SLIT3O75094 1523 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 ARFGEF2Q9Y6D5 1785 aa16.09■□□□□ 0.17
LDB3-209ENST00000623056 CDKL5O76039 1030 aa16.08■□□□□ 0.17
LDB3-209ENST00000623056 TFRCP02786 760 aaKnown RBP16.08■□□□□ 0.17
LDB3-209ENST00000623056 MAGEA9P43362 315 aa16.08■□□□□ 0.17
LDB3-209ENST00000623056 SARSP49591 514 aaKnown RBP16.08■□□□□ 0.17
LDB3-209ENST00000623056 IRX3P78415 501 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms