RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 WRNIP1Q96S55 665 aa16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 ZNF341Q9BYN7 854 aa16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 ELP3Q9H9T3 547 aa16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 DDX4Q9NQI0 724 aaKnown RBP16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 MYO5AQ9Y4I1 1855 aaKnown RBP16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 RFX7Q2KHR2 1363 aa16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 SLC9C2Q5TAH2 1124 aa16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 SPRYD7Q5W111 196 aa16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 MIGA1Q8NAN2 632 aa16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 EDC3Q96F86 508 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 HAUS7Q99871 368 aa16.95■□□□□ 0.3
PCDHGC3-208ENST00000622836 CA12O43570 354 aa16.94■□□□□ 0.3
PCDHGC3-208ENST00000622836 PPP4CP60510 307 aa16.94■□□□□ 0.3
PCDHGC3-208ENST00000622836 SREBF2Q12772 1141 aa16.94■□□□□ 0.3
PCDHGC3-208ENST00000622836 VGLL4Q14135 290 aa16.94■□□□□ 0.3
PCDHGC3-208ENST00000622836 CERS3Q8IU89 383 aa16.94■□□□□ 0.3
PCDHGC3-208ENST00000622836 WNK4Q96J92 1243 aa16.94■□□□□ 0.3
PCDHGC3-208ENST00000622836 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCDHGC3-208ENST00000622836 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 ZBTB48P10074 688 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 PDE6AP16499 860 aa16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 DYNLL1P63167 89 aaKnown RBP16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 TSHZ3Q63HK5 1081 aa16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 TGFBRAP1Q8WUH2 860 aa16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 OSBPL5Q9H0X9 879 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 TSKSQ9UJT2 592 aa16.93■□□□□ 0.3
PCDHGC3-208ENST00000622836 DOCK2Q92608 1830 aa16.92■□□□□ 0.3
PCDHGC3-208ENST00000622836 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
PCDHGC3-208ENST00000622836 ERC2O15083 957 aa16.92■□□□□ 0.3
PCDHGC3-208ENST00000622836 USP5P45974 858 aa16.92■□□□□ 0.3
PCDHGC3-208ENST00000622836 LBX1P52954 281 aa16.92■□□□□ 0.3
PCDHGC3-208ENST00000622836 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
PCDHGC3-208ENST00000622836 ZNF532Q9HCE3 1301 aa16.92■□□□□ 0.3
PCDHGC3-208ENST00000622836 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
PCDHGC3-208ENST00000622836 MX1P20591 662 aa16.91■□□□□ 0.3
PCDHGC3-208ENST00000622836 INPP5BP32019 993 aa16.91■□□□□ 0.3
PCDHGC3-208ENST00000622836 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
PCDHGC3-208ENST00000622836 OTUD5Q96G74 571 aa16.91■□□□□ 0.3
PCDHGC3-208ENST00000622836 FLT1P17948 1338 aa16.91■□□□□ 0.3
PCDHGC3-208ENST00000622836 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
PCDHGC3-208ENST00000622836 MANSC4A6NHS7 340 aaPredicted RBP16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 TRPA1O75762 1119 aa16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 HSPA8P11142 646 aaKnown RBP16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 ZSCAN25Q6NSZ9 544 aa16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 OTUD7AQ8TE49 926 aaPredicted RBP16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 RNF186Q9NXI6 227 aa16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 SNCAIPQ9Y6H5 919 aa16.9■□□□□ 0.3
PCDHGC3-208ENST00000622836 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.3
PCDHGC3-208ENST00000622836 SPDYE5A6NIY4 337 aa16.89■□□□□ 0.29
PCDHGC3-208ENST00000622836 ERO1BQ86YB8 467 aa16.89■□□□□ 0.29
PCDHGC3-208ENST00000622836 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
PCDHGC3-208ENST00000622836 SAGE1Q9NXZ1 904 aa16.89■□□□□ 0.29
PCDHGC3-208ENST00000622836 SAP30BPQ9UHR5 308 aaKnown RBP16.89■□□□□ 0.29
PCDHGC3-208ENST00000622836 COL2A1P02458 1487 aaPredicted RBP16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 IGHDP01880 384 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 HLA-DOAP06340 250 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 ADD2P35612 726 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 GJA5P36382 358 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 TM4SF4P48230 202 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 INHBEP58166 350 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 CRACR2BQ8N4Y2 399 aaPredicted RBP16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 CRNKL1Q9BZJ0 848 aaKnown RBP16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 PI4KBQ9UBF8 816 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 ZNF112Q9UJU3 913 aa16.88■□□□□ 0.29
PCDHGC3-208ENST00000622836 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
PCDHGC3-208ENST00000622836 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
PCDHGC3-208ENST00000622836 GTF2A2P52657 109 aa16.87■□□□□ 0.29
PCDHGC3-208ENST00000622836 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
PCDHGC3-208ENST00000622836 RIOK1Q9BRS2 568 aaKnown RBP16.87■□□□□ 0.29
PCDHGC3-208ENST00000622836 PRDM10Q9NQV6 1147 aa16.87■□□□□ 0.29
PCDHGC3-208ENST00000622836 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
PCDHGC3-208ENST00000622836 PALD1Q9ULE6 856 aa16.87■□□□□ 0.29
PCDHGC3-208ENST00000622836 PHF20L1A8MW92 1017 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 TBC1D12O60347 775 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 MBD4O95243 580 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 SLURP2P0DP57 97 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 PPATQ06203 517 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 UBE3CQ15386 1083 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 LRRFIP1Q32MZ4 808 aaKnown RBP16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 SLFNL1Q499Z3 407 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 COL13A1Q5TAT6 717 aaPredicted RBP16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 SMC5Q8IY18 1101 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 SCYL3Q8IZE3 742 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 KBTBD3Q8NAB2 608 aa16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 ARMT1Q9H993 441 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms