RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 SCUBE2Q9NQ36 999 aa8.29□□□□□ -1.08
CBWD3-219ENST00000622817 AATFQ9NY61 560 aaKnown RBP eCLIP8.29□□□□□ -1.08
CBWD3-219ENST00000622817 PPP1R1BQ9UD71 204 aaPredicted RBP8.29□□□□□ -1.08
CBWD3-219ENST00000622817 MROH7-TTC4A0A0A0MT08 1334 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 PPIP5K2O43314 1243 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 PLCG2P16885 1265 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 FKBP1AP62942 108 aaKnown RBP8.28□□□□□ -1.08
CBWD3-219ENST00000622817 EXOSC10Q01780 885 aaKnown RBP8.28□□□□□ -1.08
CBWD3-219ENST00000622817 TRDNQ13061 729 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 CUL4AQ13619 759 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 DIXDC1Q155Q3 683 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 AOC3Q16853 763 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 STRIP1Q5VSL9 837 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 NOL8Q76FK4 1167 aaKnown RBP8.28□□□□□ -1.08
CBWD3-219ENST00000622817 RALYLQ86SE5 291 aaKnown RBP8.28□□□□□ -1.08
CBWD3-219ENST00000622817 NCOA7Q8NI08 942 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 INTS4Q96HW7 963 aaKnown RBP8.28□□□□□ -1.08
CBWD3-219ENST00000622817 DBNDD1Q9H9R9 158 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 CWC22Q9HCG8 908 aaKnown RBP8.28□□□□□ -1.08
CBWD3-219ENST00000622817 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
CBWD3-219ENST00000622817 ATP8A2Q9NTI2 1148 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 KIAA1551Q9HCM1 1747 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 WDR19Q8NEZ3 1342 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 GPR75-ASB3A0A0A6YYF3 556 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 USP17L3A6NCW0 530 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 USP17L4A6NCW7 530 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 FGD1P98174 961 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 USP17L1Q7RTZ2 530 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 SDR42E1Q8WUS8 393 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 NBPF3Q9H094 633 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 OCEL1Q9H607 264 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 CNNM2Q9H8M5 875 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 CHMP5Q9NZZ3 219 aa8.28□□□□□ -1.08
CBWD3-219ENST00000622817 GAKO14976 1311 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 CHD4Q14839 1912 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 MCM5P33992 734 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 DDIT3P35638 169 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 PPARAQ07869 468 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 TOB2Q14106 344 aaPredicted RBP8.27□□□□□ -1.09
CBWD3-219ENST00000622817 AKNAD1Q5T1N1 836 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 Q6ZUG5 572 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 TBC1D10CQ8IV04 446 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 FBXL16Q8N461 479 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 CERS5Q8N5B7 392 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 RNF25Q96BH1 459 aaPredicted RBP8.27□□□□□ -1.09
CBWD3-219ENST00000622817 TCEANC2Q96MN5 208 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 RNF41Q9H4P4 317 aaPredicted RBP8.27□□□□□ -1.09
CBWD3-219ENST00000622817 SPON1Q9HCB6 807 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 ANAPC4Q9UJX5 808 aa8.27□□□□□ -1.09
CBWD3-219ENST00000622817 BTDP43251 543 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 USP5P45974 858 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 COL9A3Q14050 684 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 DACT2Q5SW24 774 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 HHIPL2Q6UWX4 724 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 MFSD6Q6ZSS7 791 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 MB21D2Q8IYB1 491 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 LARGE2Q8N3Y3 721 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 PDCD7Q8N8D1 485 aaKnown RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 SH3RF3Q8TEJ3 882 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 STAG1Q8WVM7 1258 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 MRIQ9BWK5 157 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 KRT23Q9C075 422 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 DCP1AQ9NPI6 582 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 ARPP21Q9UBL0 812 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 TPCN1Q9ULQ1 816 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 TTF2Q9UNY4 1162 aaKnown RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 LAMA4Q16363 1823 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 MYH2Q9UKX2 1941 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 MINDY4BA8MYZ0 360 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 PRC1O43663 620 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 SLC3A2P08195 630 aaKnown RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 PCP11498 1178 aaKnown RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 HDLBPQ00341 1268 aaKnown RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 CTDSPL2Q05D32 466 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 SBK1Q52WX2 424 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 CTR9Q6PD62 1173 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 BRF1Q92994 677 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 MXD3Q9BW11 206 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 AGXT2Q9BYV1 514 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 ZNF277Q9NRM2 450 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 DAGLAQ9Y4D2 1042 aa8.26□□□□□ -1.09
CBWD3-219ENST00000622817 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-219ENST00000622817 USP17L12C9JPN9 530 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 USP17L21D6R901 530 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 F8W031 263 aaPredicted RBP8.25□□□□□ -1.09
CBWD3-219ENST00000622817 ME3Q16798 604 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 AMOTL1Q8IY63 956 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 NIM1KQ8IY84 436 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 TEX11Q8IYF3 940 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 TEKT1Q969V4 418 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 CHMP4CQ96CF2 233 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 LRRC2Q9BYS8 371 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 TAOK3Q9H2K8 898 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 MCM9Q9NXL9 1143 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 MKRN1Q9UHC7 482 aaKnown RBP8.25□□□□□ -1.09
CBWD3-219ENST00000622817 ZNRF3Q9ULT6 936 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 TIAM2Q8IVF5 1701 aa8.25□□□□□ -1.09
CBWD3-219ENST00000622817 NEDD4P46934 1319 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms