RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 DEFB129Q9H1M3 183 aa23.78■■□□□ 1.4
PDLIM2-221ENST00000622702 USP40Q9NVE5 1235 aa23.78■■□□□ 1.4
PDLIM2-221ENST00000622702 CRNKL1Q9BZJ0 848 aaKnown RBP23.77■■□□□ 1.4
PDLIM2-221ENST00000622702 TEX11Q8IYF3 940 aa23.76■■□□□ 1.39
PDLIM2-221ENST00000622702 RPAP1Q9BWH6 1393 aaPredicted RBP23.76■■□□□ 1.39
PDLIM2-221ENST00000622702 TCP10L2B9ZVM9 353 aa23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 CACNB3P54284 484 aa23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 TMOD2Q9NZR1 351 aa23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 ABT1Q9ULW3 272 aaKnown RBP23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 EIF5BO60841 1220 aaKnown RBP23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 WDHD1O75717 1129 aaPredicted RBP23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 TNFAIP1Q13829 316 aa23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 RASA3Q14644 834 aa23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 FKBP1CQ5VVH2 108 aa23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 IDI2Q9BXS1 227 aa23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 SLC4A4Q9Y6R1 1079 aa23.75■■□□□ 1.39
PDLIM2-221ENST00000622702 FOXP2O15409 715 aa23.74■■□□□ 1.39
PDLIM2-221ENST00000622702 PRKAB2O43741 272 aa23.74■■□□□ 1.39
PDLIM2-221ENST00000622702 NPM3O75607 178 aaKnown RBP23.74■■□□□ 1.39
PDLIM2-221ENST00000622702 VPS53Q5VIR6 699 aa23.74■■□□□ 1.39
PDLIM2-221ENST00000622702 PPP2R3BQ9Y5P8 575 aa23.74■■□□□ 1.39
PDLIM2-221ENST00000622702 GSG1L2A8MUP6 293 aa23.73■■□□□ 1.39
PDLIM2-221ENST00000622702 PATL2C9JE40 543 aaKnown RBP23.73■■□□□ 1.39
PDLIM2-221ENST00000622702 HSPD1P10809 573 aaKnown RBP23.73■■□□□ 1.39
PDLIM2-221ENST00000622702 TNNI2P48788 182 aa23.73■■□□□ 1.39
PDLIM2-221ENST00000622702 KIAA1211Q6ZU35 1233 aa23.73■■□□□ 1.39
PDLIM2-221ENST00000622702 DSCC1Q9BVC3 393 aa23.73■■□□□ 1.39
PDLIM2-221ENST00000622702 GBA2Q9HCG7 927 aaPredicted RBP23.73■■□□□ 1.39
PDLIM2-221ENST00000622702 ATP8A2Q9NTI2 1148 aa23.73■■□□□ 1.39
PDLIM2-221ENST00000622702 REC8O95072 547 aa23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 GIMAP6Q6P9H5 292 aa23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 DNAJC5GQ8N7S2 189 aa23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 C2orf69Q8N8R5 385 aa23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 TGFBRAP1Q8WUH2 860 aa23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 SDR42E1Q8WUS8 393 aa23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 LSG1Q9H089 658 aaKnown RBP23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 MKRN1Q9UHC7 482 aaKnown RBP23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 TLL2Q9Y6L7 1015 aa23.72■■□□□ 1.39
PDLIM2-221ENST00000622702 CDK5RAP2Q96SN8 1893 aa23.71■■□□□ 1.39
PDLIM2-221ENST00000622702 NF2P35240 595 aa23.71■■□□□ 1.39
PDLIM2-221ENST00000622702 NFIAQ12857 509 aa23.71■■□□□ 1.39
PDLIM2-221ENST00000622702 SAPCD2Q86UD0 394 aa23.71■■□□□ 1.39
PDLIM2-221ENST00000622702 DCP1AQ9NPI6 582 aaPredicted RBP23.71■■□□□ 1.39
PDLIM2-221ENST00000622702 ANO2Q9NQ90 1003 aa23.71■■□□□ 1.39
PDLIM2-221ENST00000622702 FOCADQ5VW36 1801 aa23.71■■□□□ 1.39
PDLIM2-221ENST00000622702 USP5P45974 858 aa23.7■■□□□ 1.38
PDLIM2-221ENST00000622702 ALX1Q15699 326 aa23.7■■□□□ 1.38
PDLIM2-221ENST00000622702 NACAP1Q9BZK3 213 aa23.7■■□□□ 1.38
PDLIM2-221ENST00000622702 EPB41L4AQ9HCS5 686 aaPredicted RBP23.7■■□□□ 1.38
PDLIM2-221ENST00000622702 DDX4Q9NQI0 724 aaKnown RBP23.7■■□□□ 1.38
PDLIM2-221ENST00000622702 FAM198AQ9UFP1 575 aa23.7■■□□□ 1.38
PDLIM2-221ENST00000622702 CNTNAP1P78357 1384 aa23.7■■□□□ 1.38
PDLIM2-221ENST00000622702 FLT1P17948 1338 aa23.7■■□□□ 1.38
PDLIM2-221ENST00000622702 EPB41L2O43491 1005 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 ENTPD3O75355 529 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 PTH1RQ03431 593 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 NBPF12Q5TAG4 269 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 FAM83AQ86UY5 434 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 MAPKAPK5Q8IW41 473 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 IFNL3Q8IZI9 196 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 MAP4K1Q92918 833 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 BACH2Q9BYV9 841 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 TMEM39BQ9GZU3 492 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 ZMYM6O95789 1325 aa23.69■■□□□ 1.38
PDLIM2-221ENST00000622702 RASSF10A6NK89 507 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 APPP05067 770 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 DEFB115Q30KQ5 88 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 SUPT20HL1Q3ZLR7 823 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 DDRGK1Q96HY6 314 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 HUNKP57058 714 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 TTLL12Q14166 644 aaPredicted RBP23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 CDAN1Q8IWY9 1227 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 KLRG1Q96E93 195 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 TEPSINQ96N21 525 aa23.68■■□□□ 1.38
PDLIM2-221ENST00000622702 PAPPA2Q9BXP8 1791 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 SEC24BO95487 1268 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 FGAP02671 866 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 FKBP1BP68106 108 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 TCP10Q12799 353 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 PICALMQ13492 652 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 PRKG1Q13976 671 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 MOB2Q70IA6 237 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 OSBPL5Q9H0X9 879 aaPredicted RBP23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 NAPBQ9H115 298 aa23.67■■□□□ 1.38
PDLIM2-221ENST00000622702 COL2A1P02458 1487 aaPredicted RBP23.66■■□□□ 1.38
PDLIM2-221ENST00000622702 SSC5DA1L4H1 1573 aa23.66■■□□□ 1.38
PDLIM2-221ENST00000622702 TDO2P48775 406 aa23.66■■□□□ 1.38
PDLIM2-221ENST00000622702 PAXIP1Q6ZW49 1069 aaPredicted RBP23.66■■□□□ 1.38
PDLIM2-221ENST00000622702 FAM151AQ8WW52 585 aa23.66■■□□□ 1.38
PDLIM2-221ENST00000622702 U3KPZ7 1027 aaPredicted RBP23.66■■□□□ 1.38
PDLIM2-221ENST00000622702 PCNTO95613 3336 aa23.65■■□□□ 1.38
PDLIM2-221ENST00000622702 NAV1Q8NEY1 1877 aa23.65■■□□□ 1.38
PDLIM2-221ENST00000622702 DDX60LQ5H9U9 1706 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-221ENST00000622702 MCM9Q9NXL9 1143 aa23.65■■□□□ 1.38
PDLIM2-221ENST00000622702 CTNNA3Q9UI47 895 aa23.65■■□□□ 1.38
PDLIM2-221ENST00000622702 FZD1Q9UP38 647 aa23.65■■□□□ 1.38
PDLIM2-221ENST00000622702 ATRNL1Q5VV63 1379 aa23.65■■□□□ 1.38
PDLIM2-221ENST00000622702 SBK1Q52WX2 424 aa23.64■■□□□ 1.38
PDLIM2-221ENST00000622702 ZFPM1Q8IX07 1006 aa23.64■■□□□ 1.38
PDLIM2-221ENST00000622702 USP26Q9BXU7 913 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms