RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 GNL3LQ9NVN8 582 aaKnown RBP15.23■□□□□ 0.03
AGAP3-226ENST00000622464 RREB1Q92766 1687 aa15.23■□□□□ 0.03
AGAP3-226ENST00000622464 UBE4AQ14139 1066 aa15.23■□□□□ 0.03
AGAP3-226ENST00000622464 KRT40Q6A162 431 aa15.23■□□□□ 0.03
AGAP3-226ENST00000622464 ISM2Q6H9L7 571 aa15.23■□□□□ 0.03
AGAP3-226ENST00000622464 PRDM4Q9UKN5 801 aa15.23■□□□□ 0.03
AGAP3-226ENST00000622464 ZNF804BA4D1E1 1349 aa15.23■□□□□ 0.03
AGAP3-226ENST00000622464 RTL9Q8NET4 1388 aa15.22■□□□□ 0.03
AGAP3-226ENST00000622464 FAM47AQ5JRC9 791 aa15.22■□□□□ 0.03
AGAP3-226ENST00000622464 RIOK1Q9BRS2 568 aaKnown RBP15.22■□□□□ 0.03
AGAP3-226ENST00000622464 BCORQ6W2J9 1755 aa15.22■□□□□ 0.03
AGAP3-226ENST00000622464 DHX16O60231 1041 aaKnown RBP15.22■□□□□ 0.03
AGAP3-226ENST00000622464 TM4SF1P30408 202 aa15.22■□□□□ 0.03
AGAP3-226ENST00000622464 HIBADHP31937 336 aaKnown RBP15.22■□□□□ 0.03
AGAP3-226ENST00000622464 KIF23Q02241 960 aaPredicted RBP15.22■□□□□ 0.03
AGAP3-226ENST00000622464 DIXDC1Q155Q3 683 aa15.22■□□□□ 0.03
AGAP3-226ENST00000622464 RCOR1Q9UKL0 485 aa15.22■□□□□ 0.03
AGAP3-226ENST00000622464 ARAP2Q8WZ64 1704 aa15.22■□□□□ 0.03
AGAP3-226ENST00000622464 USP17L12C9JPN9 530 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 USP17L21D6R901 530 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 TPM2P07951 284 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 IARSP41252 1262 aaKnown RBP15.21■□□□□ 0.03
AGAP3-226ENST00000622464 WTAPQ15007 396 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 SPECC1Q5M775 1068 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 MYSM1Q5VVJ2 828 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 CBX8Q9HC52 389 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.21■□□□□ 0.031e-5■□□□□ 10.5
AGAP3-226ENST00000622464 CASZ1Q86V15 1759 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 LETM1O95202 739 aaPredicted RBP15.21■□□□□ 0.03
AGAP3-226ENST00000622464 NTRK3Q16288 839 aa15.21■□□□□ 0.03
AGAP3-226ENST00000622464 BIN1O00499 593 aa15.21■□□□□ 0.02
AGAP3-226ENST00000622464 NDUFA8P51970 172 aa15.21■□□□□ 0.02
AGAP3-226ENST00000622464 C11orf57Q6ZUT1 292 aaPredicted RBP15.21■□□□□ 0.02
AGAP3-226ENST00000622464 TICAM2Q86XR7 235 aa15.21■□□□□ 0.02
AGAP3-226ENST00000622464 CNBD1Q8NA66 436 aa15.21■□□□□ 0.02
AGAP3-226ENST00000622464 ZNF396Q96N95 335 aaPredicted RBP15.21■□□□□ 0.02
AGAP3-226ENST00000622464 ARID3AQ99856 593 aa15.21■□□□□ 0.02
AGAP3-226ENST00000622464 NYXQ9GZU5 481 aa15.21■□□□□ 0.02
AGAP3-226ENST00000622464 SNW1Q13573 536 aaKnown RBP15.2■□□□□ 0.02
AGAP3-226ENST00000622464 SASS6Q6UVJ0 657 aa15.2■□□□□ 0.02
AGAP3-226ENST00000622464 CCDC73Q6ZRK6 1079 aa15.2■□□□□ 0.02
AGAP3-226ENST00000622464 NSUN4Q96CB9 384 aaKnown RBP15.2■□□□□ 0.02
AGAP3-226ENST00000622464 CLIC6Q96NY7 704 aa15.2■□□□□ 0.02
AGAP3-226ENST00000622464 UBAC1Q9BSL1 405 aa15.2■□□□□ 0.02
AGAP3-226ENST00000622464 DDX19AQ9NUU7 478 aaKnown RBP15.2■□□□□ 0.02
AGAP3-226ENST00000622464 TNKSO95271 1327 aa15.2■□□□□ 0.02
AGAP3-226ENST00000622464 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
AGAP3-226ENST00000622464 LAMB2P55268 1798 aa15.2■□□□□ 0.02
AGAP3-226ENST00000622464 ALX1Q15699 326 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 SLC10A5Q5PT55 438 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 OLFM4Q6UX06 510 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 FBXL16Q8N461 479 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 TMEM87BQ96K49 555 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 TNRC6CQ9HCJ0 1690 aaKnown RBP15.19■□□□□ 0.02
AGAP3-226ENST00000622464 DOCK2Q92608 1830 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 SYNE3Q6ZMZ3 975 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 PNPLA7Q6ZV29 1317 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 FBXO33Q7Z6M2 555 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 LINC00301Q8NCQ3 95 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 MYH13Q9UKX3 1938 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 MROH7-TTC4A0A0A0MT08 1334 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 BTBD18B2RXH4 712 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 WDHD1O75717 1129 aaPredicted RBP15.19■□□□□ 0.02
AGAP3-226ENST00000622464 NR5A1Q13285 461 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 RC3H1Q5TC82 1133 aaKnown RBP15.19■□□□□ 0.02
AGAP3-226ENST00000622464 STAG1Q8WVM7 1258 aa15.19■□□□□ 0.02
AGAP3-226ENST00000622464 QTRT2Q9H974 415 aaKnown RBP15.19■□□□□ 0.02
AGAP3-226ENST00000622464 RTN1Q16799 776 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 C4BP0C0L5 1744 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 MYH2Q9UKX2 1941 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 FAM205CA6NFA0 338 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 SPTLC2O15270 562 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 KINO60870 393 aaKnown RBP15.18■□□□□ 0.02
AGAP3-226ENST00000622464 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 ZNF654Q8IZM8 581 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 FAM200AQ8TCP9 573 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 KRT23Q9C075 422 aa15.18■□□□□ 0.02
AGAP3-226ENST00000622464 ERICH2A1L162 156 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 ZNF165P49910 485 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 CTR9Q6PD62 1173 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 NOL7Q9UMY1 257 aaKnown RBP15.17■□□□□ 0.02
AGAP3-226ENST00000622464 ZKSCAN5Q9Y2L8 839 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 CHD4Q14839 1912 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 PDIA4P13667 645 aaKnown RBP15.17■□□□□ 0.02
AGAP3-226ENST00000622464 SSRP1Q08945 709 aaKnown RBP15.17■□□□□ 0.02
AGAP3-226ENST00000622464 DZIP1Q86YF9 867 aaKnown RBP15.17■□□□□ 0.02
AGAP3-226ENST00000622464 ENAHQ8N8S7 591 aaPredicted RBP15.17■□□□□ 0.02
AGAP3-226ENST00000622464 DYNLL2Q96FJ2 89 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 SDF4Q9BRK5 362 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 CCDC39Q9UFE4 941 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 SCN7AQ01118 1682 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 GNAT2P19087 354 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 ANO1Q5XXA6 986 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 CPLX2Q6PUV4 134 aaKnown RBP15.17■□□□□ 0.02
AGAP3-226ENST00000622464 SGMS1Q86VZ5 419 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 FAM13BQ9NYF5 915 aa15.17■□□□□ 0.02
AGAP3-226ENST00000622464 CACNA1SQ13698 1873 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms