RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 FMR1Q06787 632 aaKnown RBP eCLIP6.8□□□□□ -1.32
SRSF4-207ENST00000622143 NEUROD1Q13562 356 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 OCLNQ16625 522 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 USPL1Q5W0Q7 1092 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 C2CD5Q86YS7 1000 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 SCG3Q8WXD2 468 aaKnown RBP6.8□□□□□ -1.32
SRSF4-207ENST00000622143 SIN3AQ96ST3 1273 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 MBIPQ9NS73 344 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 ABT1Q9ULW3 272 aaKnown RBP6.8□□□□□ -1.32
SRSF4-207ENST00000622143 SPG7Q9UQ90 795 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 CHMP3Q9Y3E7 222 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 USP42Q9H9J4 1324 aaKnown RBP6.79□□□□□ -1.32
SRSF4-207ENST00000622143 CDK2AP1O14519 115 aa6.79□□□□□ -1.32
SRSF4-207ENST00000622143 C21orf2O43822 256 aa6.79□□□□□ -1.32
SRSF4-207ENST00000622143 PPP1R12BO60237 982 aaPredicted RBP6.79□□□□□ -1.32
SRSF4-207ENST00000622143 PDIA4P13667 645 aaKnown RBP6.79□□□□□ -1.32
SRSF4-207ENST00000622143 PHKG2P15735 406 aa6.79□□□□□ -1.32
SRSF4-207ENST00000622143 ATP4AP20648 1035 aa6.79□□□□□ -1.32
SRSF4-207ENST00000622143 CRKLP46109 303 aaKnown RBP6.79□□□□□ -1.32
SRSF4-207ENST00000622143 PDE4CQ08493 712 aa6.79□□□□□ -1.32
SRSF4-207ENST00000622143 BICDL1Q6ZP65 573 aa6.79□□□□□ -1.32
SRSF4-207ENST00000622143 CXXC1Q9P0U4 656 aaPredicted RBP6.79□□□□□ -1.32
SRSF4-207ENST00000622143 ZNF232Q9UNY5 417 aa6.79□□□□□ -1.32
SRSF4-207ENST00000622143 MYH14Q7Z406 1995 aaKnown RBP6.78□□□□□ -1.32
SRSF4-207ENST00000622143 PASKQ96RG2 1323 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 CNTNAP4Q9C0A0 1308 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 WDR33Q9C0J8 1336 aaKnown RBP6.78□□□□□ -1.32
SRSF4-207ENST00000622143 TNRC18O15417 2968 aaPredicted RBP6.78□□□□□ -1.32
SRSF4-207ENST00000622143 IGFBP4P22692 258 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 WEE1P30291 646 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 RGS19P49795 217 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 SOX10P56693 466 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 PSMA6P60900 246 aaKnown RBP6.78□□□□□ -1.32
SRSF4-207ENST00000622143 LBRQ14739 615 aaKnown RBP6.78□□□□□ -1.32
SRSF4-207ENST00000622143 DEFB115Q30KQ5 88 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 MAP1SQ66K74 1059 aaPredicted RBP6.78□□□□□ -1.32
SRSF4-207ENST00000622143 GPAT2Q6NUI2 795 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 LYPD4Q6UWN0 246 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 TTLL6Q8N841 843 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 ZDHHC1Q8WTX9 485 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 ZNF622Q969S3 477 aaKnown RBP eCLIP6.78□□□□□ -1.329e-13■■□□□ 12.7
SRSF4-207ENST00000622143 TRAIPQ9BWF2 469 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 MCOLN1Q9GZU1 580 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 CRISPLD1Q9H336 500 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 RUBCNLQ9H714 662 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 NDFIP2Q9NV92 336 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 INSRP06213 1382 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 FLT4P35916 1363 aa6.78□□□□□ -1.32
SRSF4-207ENST00000622143 AFDNP55196 1824 aaKnown RBP6.78□□□□□ -1.32
SRSF4-207ENST00000622143 AOC2O75106 756 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 FKBP5Q13451 457 aaPredicted RBP6.77□□□□□ -1.33
SRSF4-207ENST00000622143 NFIXQ14938 502 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 ARSJQ5FYB0 599 aaPredicted RBP6.77□□□□□ -1.33
SRSF4-207ENST00000622143 EFHC2Q5JST6 749 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 SH3PXD2AQ5TCZ1 1133 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 CYP4F22Q6NT55 531 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 IFNL2Q8IZJ0 200 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 TRERF1Q96PN7 1200 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 MKNK1Q9BUB5 465 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 CARD11Q9BXL7 1154 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 CFHR5Q9BXR6 569 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 ADAMTS8Q9UP79 889 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 GJA3Q9Y6H8 435 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 DLEC1Q9Y238 1755 aa6.77□□□□□ -1.33
SRSF4-207ENST00000622143 ZNF541Q9H0D2 1346 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 TJP1Q07157 1748 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 FYB1O15117 783 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 CELA2BP08218 269 aaPredicted RBP6.76□□□□□ -1.33
SRSF4-207ENST00000622143 TM4SF1P30408 202 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 SCNN1AP37088 669 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 DGKZQ13574 1117 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 B4GALNT3Q6L9W6 998 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 LDHDQ86WU2 507 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 SVOPQ8N4V2 548 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 TAF1DQ9H5J8 278 aaPredicted RBP6.76□□□□□ -1.33
SRSF4-207ENST00000622143 HCN2Q9UL51 889 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 CACNA1SQ13698 1873 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 KIF20BQ96Q89 1820 aa6.76□□□□□ -1.33
SRSF4-207ENST00000622143 COL11A2P13942 1736 aaPredicted RBP6.76□□□□□ -1.33
SRSF4-207ENST00000622143 SERTM1A2A2V5 107 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 RASSF10A6NK89 507 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 H0YIN7 160 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 EML1O00423 815 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 SERPINB2P05120 415 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 CABP4P57796 275 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 MAP2K1Q02750 393 aaPredicted RBP6.75□□□□□ -1.33
SRSF4-207ENST00000622143 TEAD4Q15561 434 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 PHLDB3Q6NSJ2 640 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 INTS5Q6P9B9 1019 aaKnown RBP6.75□□□□□ -1.33
SRSF4-207ENST00000622143 DNAJC10Q8IXB1 793 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 C1orf216Q8TAB5 229 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 ACDQ96AP0 544 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 CAPNS2Q96L46 248 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 LTBP1Q14766 1721 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 RNF123Q5XPI4 1314 aa6.75□□□□□ -1.33
SRSF4-207ENST00000622143 ADAMTS7Q9UKP4 1686 aa6.74□□□□□ -1.33
SRSF4-207ENST00000622143 NOS2P35228 1153 aa6.74□□□□□ -1.33
SRSF4-207ENST00000622143 ZNF530Q6P9A1 599 aaPredicted RBP6.74□□□□□ -1.33
SRSF4-207ENST00000622143 OLFM4Q6UX06 510 aa6.74□□□□□ -1.33
SRSF4-207ENST00000622143 CNTROBQ8N137 903 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms