RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 FBXO46Q6PJ61 603 aaPredicted RBP25.17■■□□□ 1.62
SMC6-210ENST00000621152 ZFYVE28Q9HCC9 887 aa25.17■■□□□ 1.62
SMC6-210ENST00000621152 DDX4Q9NQI0 724 aaKnown RBP25.17■■□□□ 1.62
SMC6-210ENST00000621152 RCAN3Q9UKA8 241 aa25.17■■□□□ 1.62
SMC6-210ENST00000621152 MYH2Q9UKX2 1941 aa25.17■■□□□ 1.62
SMC6-210ENST00000621152 DDTLA6NHG4 134 aaPredicted RBP25.16■■□□□ 1.62
SMC6-210ENST00000621152 SP3Q02447 781 aa25.16■■□□□ 1.62
SMC6-210ENST00000621152 EAF2Q96CJ1 260 aaPredicted RBP25.16■■□□□ 1.62
SMC6-210ENST00000621152 COG6Q9Y2V7 657 aa25.16■■□□□ 1.62
SMC6-210ENST00000621152 TRIM17Q9Y577 477 aa25.16■■□□□ 1.62
SMC6-210ENST00000621152 MLLT1Q03111 559 aaPredicted RBP25.15■■□□□ 1.62
SMC6-210ENST00000621152 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.15■■□□□ 1.62
SMC6-210ENST00000621152 ERO1AQ96HE7 468 aa25.15■■□□□ 1.62
SMC6-210ENST00000621152 DBNLQ9UJU6 430 aaKnown RBP25.15■■□□□ 1.62
SMC6-210ENST00000621152 EXOC6BQ9Y2D4 811 aa25.15■■□□□ 1.62
SMC6-210ENST00000621152 AK9Q5TCS8 1911 aa25.14■■□□□ 1.62
SMC6-210ENST00000621152 PHF20L1A8MW92 1017 aa25.14■■□□□ 1.62
SMC6-210ENST00000621152 BTBD19C9JJ37 291 aa25.14■■□□□ 1.62
SMC6-210ENST00000621152 MAP4K4O95819 1239 aaPredicted RBP25.14■■□□□ 1.62
SMC6-210ENST00000621152 CYP2E1P05181 493 aaPredicted RBP25.14■■□□□ 1.62
SMC6-210ENST00000621152 CD99L2Q8TCZ2 262 aa25.14■■□□□ 1.62
SMC6-210ENST00000621152 ZNF512BQ96KM6 892 aaPredicted RBP25.14■■□□□ 1.62
SMC6-210ENST00000621152 SLURP2P0DP57 97 aa25.13■■□□□ 1.61
SMC6-210ENST00000621152 ZAP70P43403 619 aa25.13■■□□□ 1.61
SMC6-210ENST00000621152 SOX10P56693 466 aa25.13■■□□□ 1.61
SMC6-210ENST00000621152 MAP3K10Q02779 954 aa25.13■■□□□ 1.61
SMC6-210ENST00000621152 NOL9Q5SY16 702 aaKnown RBP25.13■■□□□ 1.61
SMC6-210ENST00000621152 NAA16Q6N069 864 aaPredicted RBP25.13■■□□□ 1.61
SMC6-210ENST00000621152 OTOP1Q7RTM1 612 aa25.13■■□□□ 1.61
SMC6-210ENST00000621152 NOL10Q9BSC4 688 aaKnown RBP25.13■■□□□ 1.61
SMC6-210ENST00000621152 TLR7Q9NYK1 1049 aaKnown RBP25.13■■□□□ 1.61
SMC6-210ENST00000621152 DDX19BQ9UMR2 479 aa25.13■■□□□ 1.61
SMC6-210ENST00000621152 NPM3O75607 178 aaKnown RBP25.12■■□□□ 1.61
SMC6-210ENST00000621152 ERC1Q8IUD2 1116 aa25.12■■□□□ 1.61
SMC6-210ENST00000621152 RPAP2Q8IXW5 612 aaPredicted RBP25.12■■□□□ 1.61
SMC6-210ENST00000621152 RFX7Q2KHR2 1363 aa25.11■■□□□ 1.61
SMC6-210ENST00000621152 HSP90AB4PQ58FF6 505 aa25.11■■□□□ 1.61
SMC6-210ENST00000621152 PICK1Q9NRD5 415 aa25.11■■□□□ 1.61
SMC6-210ENST00000621152 ZBTB40Q9NUA8 1239 aa25.11■■□□□ 1.61
SMC6-210ENST00000621152 ATRNL1Q5VV63 1379 aa25.1■■□□□ 1.61
SMC6-210ENST00000621152 BAG3O95817 575 aa25.1■■□□□ 1.61
SMC6-210ENST00000621152 AACSQ86V21 672 aa25.1■■□□□ 1.61
SMC6-210ENST00000621152 TEX11Q8IYF3 940 aa25.1■■□□□ 1.61
SMC6-210ENST00000621152 SCYL3Q8IZE3 742 aa25.1■■□□□ 1.61
SMC6-210ENST00000621152 EFCC1Q9HA90 598 aa25.1■■□□□ 1.61
SMC6-210ENST00000621152 ZCCHC17Q9NP64 241 aaKnown RBP25.1■■□□□ 1.61
SMC6-210ENST00000621152 PIH1D3Q9NQM4 214 aaKnown RBP25.1■■□□□ 1.61
SMC6-210ENST00000621152 KCNH4Q9UQ05 1017 aa25.1■■□□□ 1.61
SMC6-210ENST00000621152 ZHX2Q9Y6X8 837 aa25.1■■□□□ 1.61
SMC6-210ENST00000621152 LAMB1P07942 1786 aa25.09■■□□□ 1.61
SMC6-210ENST00000621152 SH3RF3Q8TEJ3 882 aaPredicted RBP25.09■■□□□ 1.61
SMC6-210ENST00000621152 CHMP4BQ9H444 224 aaKnown RBP25.09■■□□□ 1.61
SMC6-210ENST00000621152 AATFQ9NY61 560 aaKnown RBP eCLIP25.09■■□□□ 1.61
SMC6-210ENST00000621152 CXCL11O14625 94 aa25.08■■□□□ 1.61
SMC6-210ENST00000621152 TBC1D12O60347 775 aa25.08■■□□□ 1.61
SMC6-210ENST00000621152 TLR2O60603 784 aa25.08■■□□□ 1.61
SMC6-210ENST00000621152 CTNND1O60716 968 aaKnown RBP25.08■■□□□ 1.61
SMC6-210ENST00000621152 PPP4CP60510 307 aa25.08■■□□□ 1.61
SMC6-210ENST00000621152 RHPN1Q8TCX5 695 aa25.08■■□□□ 1.61
SMC6-210ENST00000621152 IL1RAPL2Q9NP60 686 aa25.08■■□□□ 1.61
SMC6-210ENST00000621152 APBB1O00213 710 aa25.07■■□□□ 1.6
SMC6-210ENST00000621152 HMMRO75330 724 aa25.07■■□□□ 1.6
SMC6-210ENST00000621152 PTPRAP18433 802 aa25.07■■□□□ 1.6
SMC6-210ENST00000621152 CAP1Q01518 475 aa25.07■■□□□ 1.6
SMC6-210ENST00000621152 ARHGEF6Q15052 776 aa25.07■■□□□ 1.6
SMC6-210ENST00000621152 ANKRD23Q86SG2 305 aa25.07■■□□□ 1.6
SMC6-210ENST00000621152 SIRT2Q8IXJ6 389 aa25.07■■□□□ 1.6
SMC6-210ENST00000621152 OSBPL5Q9H0X9 879 aaPredicted RBP25.07■■□□□ 1.6
SMC6-210ENST00000621152 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.07■■□□□ 1.6
SMC6-210ENST00000621152 PTPN22Q9Y2R2 807 aa25.07■■□□□ 1.6
SMC6-210ENST00000621152 PDHXO00330 501 aa25.06■■□□□ 1.6
SMC6-210ENST00000621152 PLCG2P16885 1265 aa25.06■■□□□ 1.6
SMC6-210ENST00000621152 BCL11AQ9H165 835 aa25.06■■□□□ 1.6
SMC6-210ENST00000621152 FAM196BA6NMK8 535 aa25.05■■□□□ 1.6
SMC6-210ENST00000621152 IGSF3O75054 1194 aa25.05■■□□□ 1.6
SMC6-210ENST00000621152 IDH1O75874 414 aaKnown RBP25.05■■□□□ 1.6
SMC6-210ENST00000621152 CYP7A1P22680 504 aa25.05■■□□□ 1.6
SMC6-210ENST00000621152 MOGSQ13724 837 aa25.05■■□□□ 1.6
SMC6-210ENST00000621152 ADGRA1Q86SQ6 560 aa25.05■■□□□ 1.6
SMC6-210ENST00000621152 TGFBRAP1Q8WUH2 860 aa25.05■■□□□ 1.6
SMC6-210ENST00000621152 NDUFB9Q9Y6M9 179 aa25.05■■□□□ 1.6
SMC6-210ENST00000621152 C20orf194Q5TEA3 1177 aa25.04■■□□□ 1.6
SMC6-210ENST00000621152 KIF1BPQ96EK5 621 aa25.04■■□□□ 1.6
SMC6-210ENST00000621152 AFG3L2Q9Y4W6 797 aa25.04■■□□□ 1.6
SMC6-210ENST00000621152 PDE3AQ14432 1141 aa25.03■■□□□ 1.6
SMC6-210ENST00000621152 CLASRPQ8N2M8 674 aaKnown RBP25.03■■□□□ 1.6
SMC6-210ENST00000621152 ANTXR1Q9H6X2 564 aa25.03■■□□□ 1.6
SMC6-210ENST00000621152 DYNLL1P63167 89 aaKnown RBP25.02■■□□□ 1.6
SMC6-210ENST00000621152 KIF22Q14807 665 aa25.02■■□□□ 1.6
SMC6-210ENST00000621152 GPAT2Q6NUI2 795 aa25.02■■□□□ 1.6
SMC6-210ENST00000621152 C17orf99Q6UX52 265 aa25.02■■□□□ 1.6
SMC6-210ENST00000621152 FASTKD5Q7L8L6 764 aaKnown RBP25.02■■□□□ 1.6
SMC6-210ENST00000621152 MAPKAPK5Q8IW41 473 aa25.02■■□□□ 1.6
SMC6-210ENST00000621152 PI4KBQ9UBF8 816 aa25.02■■□□□ 1.6
SMC6-210ENST00000621152 CPA4Q9UI42 421 aa25.02■■□□□ 1.6
SMC6-210ENST00000621152 RAB11FIP3O75154 756 aa25.01■■□□□ 1.59
SMC6-210ENST00000621152 CCDC84Q86UT8 332 aaPredicted RBP25.01■■□□□ 1.59
SMC6-210ENST00000621152 MAGEB6Q8N7X4 407 aa25.01■■□□□ 1.59
SMC6-210ENST00000621152 DHX36Q9H2U1 1008 aaKnown RBP25.01■■□□□ 1.59
SMC6-210ENST00000621152 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms