RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 KDM6AO15550 1401 aaPredicted RBP9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 ITGA6P23229 1130 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 IL15P40933 162 aaPredicted RBP9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 RABL6Q3YEC7 729 aaPredicted RBP9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 HSP90B2PQ58FF3 399 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 FCHSD1Q86WN1 690 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 LLPHQ9BRT6 129 aaKnown RBP9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 TNNI2P48788 182 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 HELLSQ9NRZ9 838 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 ANO10Q9NW15 660 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 CTAGE5O15320 804 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 RNF113AO15541 343 aaKnown RBP9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 ZBTB43O43298 467 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 CTDNEP1O95476 244 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 U2AF2P26368 475 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 TDRD12Q587J7 1177 aaKnown RBP9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 DPH6Q7L8W6 267 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 PLA2G4DQ86XP0 818 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 GPIHBP1Q8IV16 184 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 MAST3O60307 1309 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 SH3TC1Q8TE82 1336 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 PCDH11XQ9BZA7 1347 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 PCDH11YQ9BZA8 1340 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 SKILP12757 684 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 ERCC3P19447 782 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 PDIA3P30101 505 aaKnown RBP9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 HDAC9Q9UKV0 1011 aa9.45□□□□□ -0.9
PTPDC1-204ENST00000620992 LMO7Q8WWI1 1683 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 EYA2O00167 538 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 LDHBP07195 334 aaKnown RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 TTF1Q15361 905 aaPredicted RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 CACNA2D4Q7Z3S7 1137 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 DSCC1Q9BVC3 393 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 NEBLO76041 1014 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 KIF20AO95235 890 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 CALM1P0DP23 149 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 CALM2P0DP24 149 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 CALM3P0DP25 149 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 GTF2F1P35269 517 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 FAM160A1Q05DH4 1040 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 ZMYM1Q5SVZ6 1142 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 SYCP3Q8IZU3 236 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 SMARCC2Q8TAQ2 1214 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 QTRT2Q9H974 415 aaKnown RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 GJB4Q9NTQ9 266 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 RCOR1Q9UKL0 485 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 NBPF26B4DH59 902 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 M0R2C6 588 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 MBD4O95243 580 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 CAVIN2O95810 425 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 UQCRFS1P1P0C7P4 283 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 MAPK8IP2Q13387 824 aaPredicted RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 NBPF10Q6P3W6 841 aaKnown RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 ATG9AQ7Z3C6 839 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 NBPF15Q8N660 670 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 MRPS27Q92552 414 aaKnown RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 V9GYY5 206 aaPredicted RBP9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 OVOS2A0A0G2JMS6 1433 aa9.44□□□□□ -0.9
PTPDC1-204ENST00000620992 FOXO4P98177 505 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 NAA30Q147X3 362 aaPredicted RBP9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 CEP135Q66GS9 1140 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 OSBP2Q969R2 916 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 HOMER2Q9NSB8 354 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 TCP11L1Q9NUJ3 509 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 MAGEB6P1A0A0J9YX57 407 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 ADORA1P30542 326 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 PTPN14Q15678 1187 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 KIAA1328Q86T90 577 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 ESR2Q92731 530 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 ALG1Q9BT22 464 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 MYL10Q9BUA6 226 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 ASAP1Q9ULH1 1129 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 ATF5Q9Y2D1 282 aaPredicted RBP9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 CRYBG1Q9Y4K1 1723 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 PRC1O43663 620 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 KIF5BP33176 963 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 ARHGAP29Q52LW3 1261 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 RBM43Q6ZSC3 357 aaKnown RBP9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 LRRC8AQ8IWT6 810 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 CCDC97Q96F63 343 aaPredicted RBP9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 PCDHA7Q9UN72 937 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 MEGF6O75095 1541 aa9.43□□□□□ -0.9
PTPDC1-204ENST00000620992 NAPAP54920 295 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 IQCB1Q15051 598 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 TMEM266Q2M3C6 531 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 PI16Q6UXB8 463 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 ZNF804AQ7Z570 1209 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 TEX11Q8IYF3 940 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 ZSWIM4Q9H7M6 989 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 H7C1W4 665 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 IGSF3O75054 1194 aa9.42□□□□□ -0.9
PTPDC1-204ENST00000620992 PPP4R3AQ6IN85 833 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms