RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 DTNBO60941 627 aa17.96■□□□□ 0.47
PSMC3-213ENST00000619920 SLC3A2P08195 630 aaKnown RBP17.96■□□□□ 0.47
PSMC3-213ENST00000619920 GRIK5Q16478 980 aa17.96■□□□□ 0.47
PSMC3-213ENST00000619920 MFSD14BQ5SR56 506 aa17.96■□□□□ 0.47
PSMC3-213ENST00000619920 DEFB132Q7Z7B7 95 aa17.96■□□□□ 0.47
PSMC3-213ENST00000619920 SLC16A10Q8TF71 515 aa17.96■□□□□ 0.47
PSMC3-213ENST00000619920 USP17L12C9JPN9 530 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 USP17L21D6R901 530 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 RIMBP2O15034 1052 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 APOA5Q6Q788 366 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 CDC37L1Q7L3B6 337 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 RGS22Q8NE09 1264 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 DDX11Q96FC9 970 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 CHAMP1Q96JM3 812 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 TOMM22Q9NS69 142 aa17.96■□□□□ 0.46
PSMC3-213ENST00000619920 GPR75-ASB3A0A0A6YYF3 556 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 ERICH2A1L162 156 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 H3BQV1 296 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 MBD3O95983 291 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 PLCG2P16885 1265 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 RCAN1P53805 252 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 DIXDC1Q155Q3 683 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 CSPP1Q1MSJ5 1256 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 RRP12Q5JTH9 1297 aaKnown RBP17.95■□□□□ 0.46
PSMC3-213ENST00000619920 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 CC2D2BQ6DHV5 1058 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 NFXL1Q6ZNB6 911 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 CCDC125Q86Z20 511 aa17.95■□□□□ 0.46
PSMC3-213ENST00000619920 RTFDC1Q9BY42 306 aaPredicted RBP17.95■□□□□ 0.46
PSMC3-213ENST00000619920 MKRN1Q9UHC7 482 aaKnown RBP17.95■□□□□ 0.46
PSMC3-213ENST00000619920 CCDC69A6NI79 296 aa17.94■□□□□ 0.46
PSMC3-213ENST00000619920 CPLX1O14810 134 aa17.94■□□□□ 0.46
PSMC3-213ENST00000619920 ZBTB43O43298 467 aa17.94■□□□□ 0.46
PSMC3-213ENST00000619920 ORC4O43929 436 aa17.94■□□□□ 0.46
PSMC3-213ENST00000619920 CDKL5O76039 1030 aa17.94■□□□□ 0.46
PSMC3-213ENST00000619920 METAP2P50579 478 aaKnown RBP eCLIP17.94■□□□□ 0.46
PSMC3-213ENST00000619920 GTF2IP78347 998 aa17.94■□□□□ 0.46
PSMC3-213ENST00000619920 OLFM4Q6UX06 510 aa17.94■□□□□ 0.46
PSMC3-213ENST00000619920 SYNE3Q6ZMZ3 975 aa17.94■□□□□ 0.46
PSMC3-213ENST00000619920 ZSCAN16Q9H4T2 348 aaPredicted RBP17.94■□□□□ 0.46
PSMC3-213ENST00000619920 NID2Q14112 1375 aa17.93■□□□□ 0.46
PSMC3-213ENST00000619920 GAKO14976 1311 aa17.93■□□□□ 0.46
PSMC3-213ENST00000619920 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
PSMC3-213ENST00000619920 USP5P45974 858 aa17.93■□□□□ 0.46
PSMC3-213ENST00000619920 WTAPQ15007 396 aa17.93■□□□□ 0.46
PSMC3-213ENST00000619920 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
PSMC3-213ENST00000619920 SH3RF3Q8TEJ3 882 aaPredicted RBP17.93■□□□□ 0.46
PSMC3-213ENST00000619920 UBAC1Q9BSL1 405 aa17.93■□□□□ 0.46
PSMC3-213ENST00000619920 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.93■□□□□ 0.46
PSMC3-213ENST00000619920 SLC12A7Q9Y666 1083 aa17.93■□□□□ 0.46
PSMC3-213ENST00000619920 FDPSP14324 419 aaKnown RBP17.92■□□□□ 0.46
PSMC3-213ENST00000619920 CHRNA5P30532 468 aa17.92■□□□□ 0.46
PSMC3-213ENST00000619920 FOXD4L6Q3SYB3 417 aaPredicted RBP17.92■□□□□ 0.46
PSMC3-213ENST00000619920 FOXD4L3Q6VB84 417 aaPredicted RBP17.92■□□□□ 0.46
PSMC3-213ENST00000619920 PODNQ7Z5L7 613 aa17.92■□□□□ 0.46
PSMC3-213ENST00000619920 USP48Q86UV5 1035 aa17.92■□□□□ 0.46
PSMC3-213ENST00000619920 GZF1Q9H116 711 aaPredicted RBP17.92■□□□□ 0.46
PSMC3-213ENST00000619920 MCM9Q9NXL9 1143 aa17.92■□□□□ 0.46
PSMC3-213ENST00000619920 G3V3G9 751 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 NCLP19338 710 aaKnown RBP17.91■□□□□ 0.46
PSMC3-213ENST00000619920 BTDP43251 543 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 PDE4BQ07343 736 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 GRIPAP1Q4V328 841 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 DCAF8Q5TAQ9 597 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 C12orf60Q5U649 245 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 AMOTL1Q8IY63 956 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 C7orf43Q8WVR3 580 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 SENP2Q9HC62 589 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 CNPY2Q9Y2B0 182 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 BAZ2AQ9UIF9 1905 aaKnown RBP17.91■□□□□ 0.46
PSMC3-213ENST00000619920 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 MYH2Q9UKX2 1941 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 DNM1Q05193 864 aaKnown RBP17.91■□□□□ 0.46
PSMC3-213ENST00000619920 SEC23AQ15436 765 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 STK11IPQ8N1F8 1099 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 GPT2Q8TD30 523 aa17.91■□□□□ 0.46
PSMC3-213ENST00000619920 ZSCAN10Q96SZ4 725 aaPredicted RBP17.91■□□□□ 0.46
PSMC3-213ENST00000619920 GOLGA8AA7E2F4 631 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 FKBP1AP62942 108 aaKnown RBP17.9■□□□□ 0.46
PSMC3-213ENST00000619920 KRT85P78386 507 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 RESTQ13127 1097 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 PPP2R5BQ15173 497 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 DOK7Q18PE1 504 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 FERMT3Q86UX7 667 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 IQCA1Q86XH1 822 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 ORC3Q9UBD5 711 aaPredicted RBP17.9■□□□□ 0.46
PSMC3-213ENST00000619920 ISY1Q9ULR0 285 aaKnown RBP17.9■□□□□ 0.46
PSMC3-213ENST00000619920 LAMB1P07942 1786 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 ROBO3Q96MS0 1386 aa17.9■□□□□ 0.46
PSMC3-213ENST00000619920 SLX4Q8IY92 1834 aa17.89■□□□□ 0.46
PSMC3-213ENST00000619920 CCDC196A0A1B0GTZ2 297 aa17.89■□□□□ 0.45
PSMC3-213ENST00000619920 SMIM22K7EJ46 135 aa17.89■□□□□ 0.45
PSMC3-213ENST00000619920 RANBP6O60518 1105 aaKnown RBP17.89■□□□□ 0.45
PSMC3-213ENST00000619920 USP17L8P0C7I0 530 aa17.89■□□□□ 0.45
PSMC3-213ENST00000619920 ADD1P35611 737 aaKnown RBP17.89■□□□□ 0.45
PSMC3-213ENST00000619920 MICU3Q86XE3 530 aa17.89■□□□□ 0.45
PSMC3-213ENST00000619920 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
PSMC3-213ENST00000619920 ZKSCAN3Q9BRR0 538 aa17.89■□□□□ 0.45
PSMC3-213ENST00000619920 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
PSMC3-213ENST00000619920 FAM217BQ9NTX9 383 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms