RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 ZNRF3Q9ULT6 936 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 GJA3Q9Y6H8 435 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 PAPPA2Q9BXP8 1791 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 HTTP42858 3142 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 UBN2Q6ZU65 1347 aa9.66□□□□□ -0.86
SENP3-210ENST00000619785 M0R2N6 131 aa9.66□□□□□ -0.86
SENP3-210ENST00000619785 HTATSF1O43719 755 aaKnown RBP9.66□□□□□ -0.86
SENP3-210ENST00000619785 IGSF3O75054 1194 aa9.66□□□□□ -0.86
SENP3-210ENST00000619785 HSPA5P11021 654 aaKnown RBP9.66□□□□□ -0.86
SENP3-210ENST00000619785 NOM1Q5C9Z4 860 aaKnown RBP9.66□□□□□ -0.86
SENP3-210ENST00000619785 SLC10A5Q5PT55 438 aa9.66□□□□□ -0.86
SENP3-210ENST00000619785 ZNF34Q8IZ26 560 aa9.66□□□□□ -0.86
SENP3-210ENST00000619785 KCTD15Q96SI1 283 aaPredicted RBP9.66□□□□□ -0.86
SENP3-210ENST00000619785 GLIS2Q9BZE0 524 aaPredicted RBP9.66□□□□□ -0.86
SENP3-210ENST00000619785 BCL11AQ9H165 835 aa9.66□□□□□ -0.86
SENP3-210ENST00000619785 ATP6V0A2Q9Y487 856 aa9.66□□□□□ -0.86
SENP3-210ENST00000619785 MKI67P46013 3256 aaKnown RBP9.66□□□□□ -0.86
SENP3-210ENST00000619785 MAP3K15Q6ZN16 1313 aa9.65□□□□□ -0.86
SENP3-210ENST00000619785 NTSR2O95665 410 aa9.65□□□□□ -0.86
SENP3-210ENST00000619785 SH3BP2P78314 561 aa9.65□□□□□ -0.86
SENP3-210ENST00000619785 KIAA2012Q0VF49 1180 aa9.65□□□□□ -0.86
SENP3-210ENST00000619785 NIM1KQ8IY84 436 aa9.65□□□□□ -0.86
SENP3-210ENST00000619785 PHACTR3Q96KR7 559 aa9.65□□□□□ -0.86
SENP3-210ENST00000619785 SEPT3Q9UH03 358 aa9.65□□□□□ -0.86
SENP3-210ENST00000619785 PPEF1O14829 653 aaPredicted RBP9.64□□□□□ -0.87
SENP3-210ENST00000619785 WEE1P30291 646 aa9.64□□□□□ -0.87
SENP3-210ENST00000619785 PIP4K2AP48426 406 aaPredicted RBP9.64□□□□□ -0.87
SENP3-210ENST00000619785 GMPSP49915 693 aaPredicted RBP9.64□□□□□ -0.87
SENP3-210ENST00000619785 RGMBQ6NW40 437 aa9.64□□□□□ -0.87
SENP3-210ENST00000619785 VASH1Q7L8A9 365 aaPredicted RBP9.64□□□□□ -0.87
SENP3-210ENST00000619785 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
SENP3-210ENST00000619785 SLC51AQ86UW1 340 aa9.64□□□□□ -0.87
SENP3-210ENST00000619785 NPAS4Q8IUM7 802 aa9.64□□□□□ -0.87
SENP3-210ENST00000619785 ZSCAN29Q8IWY8 852 aaPredicted RBP9.64□□□□□ -0.87
SENP3-210ENST00000619785 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.64□□□□□ -0.87
SENP3-210ENST00000619785 SUPT20HQ8NEM7 779 aa9.64□□□□□ -0.87
SENP3-210ENST00000619785 DPF2Q92785 391 aa9.64□□□□□ -0.87
SENP3-210ENST00000619785 DCTN4Q9UJW0 460 aa9.64□□□□□ -0.87
SENP3-210ENST00000619785 KIAA0100Q14667 2235 aaKnown RBP9.63□□□□□ -0.87
SENP3-210ENST00000619785 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
SENP3-210ENST00000619785 PPIP5K2O43314 1243 aa9.63□□□□□ -0.87
SENP3-210ENST00000619785 PKN2Q16513 984 aaKnown RBP9.63□□□□□ -0.87
SENP3-210ENST00000619785 AOC3Q16853 763 aa9.63□□□□□ -0.87
SENP3-210ENST00000619785 CTU1Q7Z7A3 348 aaKnown RBP9.63□□□□□ -0.87
SENP3-210ENST00000619785 SP8Q8IXZ3 490 aa9.63□□□□□ -0.87
SENP3-210ENST00000619785 TRPM4Q8TD43 1214 aa9.63□□□□□ -0.87
SENP3-210ENST00000619785 RPGRQ92834 1020 aaKnown RBP9.63□□□□□ -0.87
SENP3-210ENST00000619785 RBM17Q96I25 401 aaKnown RBP9.63□□□□□ -0.87
SENP3-210ENST00000619785 CFHR5Q9BXR6 569 aa9.63□□□□□ -0.87
SENP3-210ENST00000619785 RNF186Q9NXI6 227 aa9.63□□□□□ -0.87
SENP3-210ENST00000619785 KIAA1522Q9P206 1035 aaPredicted RBP9.63□□□□□ -0.87
SENP3-210ENST00000619785 DNMT3AQ9Y6K1 912 aaPredicted RBP9.63□□□□□ -0.87
SENP3-210ENST00000619785 ABCC4O15439 1325 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 YDJCA8MPS7 323 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 HUNKP57058 714 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 FKBP5Q13451 457 aaPredicted RBP9.62□□□□□ -0.87
SENP3-210ENST00000619785 TNIP1Q15025 636 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 SUSD4Q5VX71 490 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 VTI1AQ96AJ9 217 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 GCC1Q96CN9 775 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 ZNF358Q9NW07 568 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 BRCA2P51587 3418 aa9.62□□□□□ -0.87
SENP3-210ENST00000619785 BACH1O14867 736 aa9.61□□□□□ -0.87
SENP3-210ENST00000619785 BBOX1O75936 387 aa9.61□□□□□ -0.87
SENP3-210ENST00000619785 VARSP26640 1264 aaKnown RBP9.61□□□□□ -0.87
SENP3-210ENST00000619785 SOX10P56693 466 aa9.61□□□□□ -0.87
SENP3-210ENST00000619785 GRM1Q13255 1194 aa9.61□□□□□ -0.87
SENP3-210ENST00000619785 PARP10Q53GL7 1025 aa9.61□□□□□ -0.87
SENP3-210ENST00000619785 CSRNP1Q96S65 589 aa9.61□□□□□ -0.87
SENP3-210ENST00000619785 CNOT7Q9UIV1 285 aaKnown RBP9.61□□□□□ -0.87
SENP3-210ENST00000619785 COL4A1P02462 1669 aa9.61□□□□□ -0.87
SENP3-210ENST00000619785 ECM29Q5VYK3 1845 aa9.61□□□□□ -0.87
SENP3-210ENST00000619785 ERVH48-1M5A8F1 160 aa9.6□□□□□ -0.87
SENP3-210ENST00000619785 IGFBP4P22692 258 aa9.6□□□□□ -0.87
SENP3-210ENST00000619785 RPS12P25398 132 aaKnown RBP9.6□□□□□ -0.87
SENP3-210ENST00000619785 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
SENP3-210ENST00000619785 KIF23Q02241 960 aaPredicted RBP9.6□□□□□ -0.87
SENP3-210ENST00000619785 INTS6LQ5JSJ4 861 aaKnown RBP9.6□□□□□ -0.87
SENP3-210ENST00000619785 TMC4Q7Z404 712 aa9.6□□□□□ -0.87
SENP3-210ENST00000619785 COL26A1Q96A83 441 aa9.6□□□□□ -0.87
SENP3-210ENST00000619785 ASB16Q96NS5 453 aa9.6□□□□□ -0.87
SENP3-210ENST00000619785 POLR3GLQ9BT43 218 aa9.6□□□□□ -0.87
SENP3-210ENST00000619785 GBA2Q9HCG7 927 aaPredicted RBP9.6□□□□□ -0.87
SENP3-210ENST00000619785 CENPFP49454 3210 aa9.6□□□□□ -0.87
SENP3-210ENST00000619785 GTF2E1P29083 439 aaPredicted RBP9.59□□□□□ -0.87
SENP3-210ENST00000619785 SCTRP47872 440 aa9.59□□□□□ -0.87
SENP3-210ENST00000619785 FKBP1BP68106 108 aa9.59□□□□□ -0.87
SENP3-210ENST00000619785 MTMR3Q13615 1198 aa9.59□□□□□ -0.87
SENP3-210ENST00000619785 NAA30Q147X3 362 aaPredicted RBP9.59□□□□□ -0.87
SENP3-210ENST00000619785 ARID5BQ14865 1188 aa9.59□□□□□ -0.87
SENP3-210ENST00000619785 TAF7Q15545 349 aaPredicted RBP9.59□□□□□ -0.87
SENP3-210ENST00000619785 TTLL7Q6ZT98 887 aa9.59□□□□□ -0.87
SENP3-210ENST00000619785 NLRP3Q96P20 1036 aa9.59□□□□□ -0.87
SENP3-210ENST00000619785 MAP4K5Q9Y4K4 846 aa9.59□□□□□ -0.87
SENP3-210ENST00000619785 CEP290O15078 2479 aa9.59□□□□□ -0.87
SENP3-210ENST00000619785 SHTN1A0MZ66 631 aa9.58□□□□□ -0.88
SENP3-210ENST00000619785 H7C1D1 291 aa9.58□□□□□ -0.88
SENP3-210ENST00000619785 TRIM32Q13049 653 aa9.58□□□□□ -0.88
SENP3-210ENST00000619785 MCM10Q7L590 875 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms