RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 USP17L21D6R901 530 aa23.58■■□□□ 1.36
MMP28-207ENST00000619655 CDC27P30260 824 aa23.58■■□□□ 1.36
MMP28-207ENST00000619655 EVX2Q03828 476 aa23.58■■□□□ 1.36
MMP28-207ENST00000619655 DIXDC1Q155Q3 683 aa23.58■■□□□ 1.36
MMP28-207ENST00000619655 CRAMP1Q96RY5 1269 aa23.58■■□□□ 1.36
MMP28-207ENST00000619655 MAST2Q6P0Q8 1798 aa23.57■■□□□ 1.36
MMP28-207ENST00000619655 ANKRD31Q8N7Z5 1873 aa23.57■■□□□ 1.36
MMP28-207ENST00000619655 GOLGA8AA7E2F4 631 aa23.57■■□□□ 1.36
MMP28-207ENST00000619655 CTR9Q6PD62 1173 aa23.57■■□□□ 1.36
MMP28-207ENST00000619655 TBC1D16Q8TBP0 767 aa23.57■■□□□ 1.36
MMP28-207ENST00000619655 CD209Q9NNX6 404 aa23.57■■□□□ 1.36
MMP28-207ENST00000619655 GJB4Q9NTQ9 266 aa23.57■■□□□ 1.36
MMP28-207ENST00000619655 LIFRP42702 1097 aa23.56■■□□□ 1.36
MMP28-207ENST00000619655 WTAPQ15007 396 aa23.56■■□□□ 1.36
MMP28-207ENST00000619655 SGMS1Q86VZ5 419 aa23.56■■□□□ 1.36
MMP28-207ENST00000619655 PHKBQ93100 1093 aa23.56■■□□□ 1.36
MMP28-207ENST00000619655 C8orf76Q96K31 380 aa23.56■■□□□ 1.36
MMP28-207ENST00000619655 UBAC1Q9BSL1 405 aa23.56■■□□□ 1.36
MMP28-207ENST00000619655 SCAND2PQ9GZW5 306 aaPredicted RBP23.56■■□□□ 1.36
MMP28-207ENST00000619655 PARP3Q9Y6F1 533 aa23.56■■□□□ 1.36
MMP28-207ENST00000619655 KLRG2A4D1S0 409 aaPredicted RBP23.56■■□□□ 1.36
MMP28-207ENST00000619655 ANO8Q9HCE9 1232 aaPredicted RBP23.56■■□□□ 1.36
MMP28-207ENST00000619655 ANAPC4Q9UJX5 808 aa23.56■■□□□ 1.36
MMP28-207ENST00000619655 RANBP6O60518 1105 aaKnown RBP23.55■■□□□ 1.36
MMP28-207ENST00000619655 LRSAM1Q6UWE0 723 aa23.55■■□□□ 1.36
MMP28-207ENST00000619655 OLFM4Q6UX06 510 aa23.55■■□□□ 1.36
MMP28-207ENST00000619655 SYNE3Q6ZMZ3 975 aa23.55■■□□□ 1.36
MMP28-207ENST00000619655 LEO1Q8WVC0 666 aaPredicted RBP23.55■■□□□ 1.36
MMP28-207ENST00000619655 ESR2Q92731 530 aa23.55■■□□□ 1.36
MMP28-207ENST00000619655 DCP1AQ9NPI6 582 aaPredicted RBP23.55■■□□□ 1.36
MMP28-207ENST00000619655 GOLGA6L4A6NEF3 574 aa23.54■■□□□ 1.36
MMP28-207ENST00000619655 RIMBP2O15034 1052 aa23.54■■□□□ 1.36
MMP28-207ENST00000619655 FLAD1Q8NFF5 587 aa23.54■■□□□ 1.36
MMP28-207ENST00000619655 FTOQ9C0B1 505 aaKnown RBP eCLIP23.54■■□□□ 1.36
MMP28-207ENST00000619655 RTN4Q9NQC3 1192 aaKnown RBP23.54■■□□□ 1.36
MMP28-207ENST00000619655 C15orf52Q6ZUT6 534 aaKnown RBP23.54■■□□□ 1.36
MMP28-207ENST00000619655 AIFM3Q96NN9 605 aa23.54■■□□□ 1.36
MMP28-207ENST00000619655 MYH2Q9UKX2 1941 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 SRGNP10124 158 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 CYP2D6P10635 497 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 CPLX2Q6PUV4 134 aaKnown RBP23.53■■□□□ 1.36
MMP28-207ENST00000619655 PODXL2Q9NZ53 605 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 RGS17Q9UGC6 210 aaPredicted RBP23.53■■□□□ 1.36
MMP28-207ENST00000619655 CDKL5O76039 1030 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 NASPP49321 788 aaPredicted RBP23.53■■□□□ 1.36
MMP28-207ENST00000619655 CCDC183Q5T5S1 534 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 GIMAP6Q6P9H5 292 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 POTEAQ6S8J7 498 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 RBSNQ9H1K0 784 aa23.53■■□□□ 1.36
MMP28-207ENST00000619655 TNS1Q9HBL0 1735 aaKnown RBP23.53■■□□□ 1.36
MMP28-207ENST00000619655 ELP1O95163 1332 aa23.52■■□□□ 1.36
MMP28-207ENST00000619655 TNKSO95271 1327 aa23.52■■□□□ 1.36
MMP28-207ENST00000619655 NUP133Q8WUM0 1156 aa23.52■■□□□ 1.36
MMP28-207ENST00000619655 ATP8A2Q9NTI2 1148 aa23.52■■□□□ 1.36
MMP28-207ENST00000619655 MCM9Q9NXL9 1143 aa23.52■■□□□ 1.36
MMP28-207ENST00000619655 CFAP45Q9UL16 551 aa23.52■■□□□ 1.36
MMP28-207ENST00000619655 DUOX1Q9NRD9 1551 aa23.52■■□□□ 1.36
MMP28-207ENST00000619655 USP5P45974 858 aa23.51■■□□□ 1.35
MMP28-207ENST00000619655 SH3RF3Q8TEJ3 882 aaPredicted RBP23.51■■□□□ 1.35
MMP28-207ENST00000619655 MYH15Q9Y2K3 1946 aa23.51■■□□□ 1.35
MMP28-207ENST00000619655 SP8Q8IXZ3 490 aa23.51■■□□□ 1.35
MMP28-207ENST00000619655 CCDC82Q8N4S0 544 aa23.51■■□□□ 1.35
MMP28-207ENST00000619655 FBXO18Q8NFZ0 1043 aa23.51■■□□□ 1.35
MMP28-207ENST00000619655 FAM217BQ9NTX9 383 aaPredicted RBP23.51■■□□□ 1.35
MMP28-207ENST00000619655 IL1R1P14778 569 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 NPR1P16066 1061 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 IARSP41252 1262 aaKnown RBP23.5■■□□□ 1.35
MMP28-207ENST00000619655 ILDR1Q86SU0 546 aaPredicted RBP23.5■■□□□ 1.35
MMP28-207ENST00000619655 FBXW7Q969H0 707 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 ALG1Q9BT22 464 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 ATP6V0A2Q9Y487 856 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 POLR3DP05423 398 aaPredicted RBP23.5■■□□□ 1.35
MMP28-207ENST00000619655 USP17L8P0C7I0 530 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 PDE6BP35913 854 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 GSTO1P78417 241 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 EN1Q05925 392 aaPredicted RBP23.5■■□□□ 1.35
MMP28-207ENST00000619655 EZH2Q15910 746 aaKnown RBP23.5■■□□□ 1.35
MMP28-207ENST00000619655 MFSD14BQ5SR56 506 aa23.5■■□□□ 1.35
MMP28-207ENST00000619655 CMTR1Q8N1G2 835 aaKnown RBP23.5■■□□□ 1.35
MMP28-207ENST00000619655 NOL10Q9BSC4 688 aaKnown RBP23.5■■□□□ 1.35
MMP28-207ENST00000619655 UBE2Q2LH0YL09 131 aa23.49■■□□□ 1.35
MMP28-207ENST00000619655 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
MMP28-207ENST00000619655 SLC26A6Q9BXS9 759 aa23.49■■□□□ 1.35
MMP28-207ENST00000619655 ARPP21Q9UBL0 812 aaPredicted RBP23.49■■□□□ 1.35
MMP28-207ENST00000619655 NRXN2Q9P2S2 1712 aa23.49■■□□□ 1.35
MMP28-207ENST00000619655 NTRK3Q16288 839 aa23.49■■□□□ 1.35
MMP28-207ENST00000619655 ZNF654Q8IZM8 581 aa23.49■■□□□ 1.35
MMP28-207ENST00000619655 RNF214Q8ND24 703 aa23.49■■□□□ 1.35
MMP28-207ENST00000619655 USP28Q96RU2 1077 aa23.49■■□□□ 1.35
MMP28-207ENST00000619655 ZSCAN10Q96SZ4 725 aaPredicted RBP23.49■■□□□ 1.35
MMP28-207ENST00000619655 BAG3O95817 575 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 LIG1P18858 919 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 RTN1Q16799 776 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 TMC4Q7Z404 712 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 ENAHQ8N8S7 591 aaPredicted RBP23.48■■□□□ 1.35
MMP28-207ENST00000619655 BICD2Q8TD16 824 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 LRRC37AA6NMS7 1700 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 LAMB1P07942 1786 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 FAM47AQ5JRC9 791 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 IQCA1Q86XH1 822 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms