RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 CEP19Q96LK0 163 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 OCA2Q04671 838 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 TMTC1Q8IUR5 882 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 ARHGAP18Q8N392 663 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 EHMT1Q9H9B1 1298 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 HNRNPH2P55795 449 aaKnown RBP16.68■□□□□ 0.26
COL5A1-208ENST00000618395 FAM133BQ5BKY9 247 aaKnown RBP16.68■□□□□ 0.26
COL5A1-208ENST00000618395 SETD1BQ9UPS6 1966 aaKnown RBP16.68■□□□□ 0.26
COL5A1-208ENST00000618395 CUL5Q93034 780 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 BOLA2Q9H3K6 86 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 CCT6AP40227 531 aaKnown RBP16.68■□□□□ 0.26
COL5A1-208ENST00000618395 CCDC15Q0P6D6 951 aa16.68■□□□□ 0.26
COL5A1-208ENST00000618395 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 BLVRAP53004 296 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 KRT80Q6KB66 452 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 MCF2LO15068 1137 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 AGTPBP1Q9UPW5 1226 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 RNASE9P60153 205 aaKnown RBP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 TTC22Q5TAA0 569 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 MRRFQ96E11 262 aaKnown RBP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 ZNF215Q9UL58 517 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 TBC1D8O95759 1140 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 EEF1B2P24534 225 aaKnown RBP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 FGD4Q96M96 766 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 ASIC3Q9UHC3 531 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 RASSF10A6NK89 507 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 MINDY4BA8MYZ0 360 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 GDAP1L1Q96MZ0 367 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 TRIM31Q9BZY9 425 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 MARCKSP29966 332 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-208ENST00000618395 PPP2R5EQ16537 467 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 RABGGTAQ92696 567 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
COL5A1-208ENST00000618395 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
COL5A1-208ENST00000618395 TRPA1O75762 1119 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 SYCE1Q8N0S2 351 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 BASP1P80723 227 aaKnown RBP16.66■□□□□ 0.26
COL5A1-208ENST00000618395 NUP58Q9BVL2 599 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 MSANTD4Q8NCY6 345 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 OLFM3Q96PB7 478 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 GOLGA8QA0A0J9YX86 632 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 GOLGA8OA6NCC3 632 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 GOLGA8NF8WBI6 632 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 PPWD1Q96BP3 646 aaKnown RBP16.66■□□□□ 0.26
COL5A1-208ENST00000618395 LRGUKQ96M69 825 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 DIABLOQ9NR28 239 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 KLHL29Q96CT2 875 aa16.66■□□□□ 0.26
COL5A1-208ENST00000618395 MKNK2Q9HBH9 465 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 RPS6KA2Q15349 733 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 TERF2Q15554 542 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 TMEM67Q5HYA8 995 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 SLC30A9Q6PML9 568 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 HS2ST1Q7LGA3 356 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 GUCY2FP51841 1108 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 ACBD5Q5T8D3 534 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-208ENST00000618395 ANKRD42Q8N9B4 389 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 ANKFY1Q9P2R3 1169 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
COL5A1-208ENST00000618395 SPOPO43791 374 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 MICU3Q86XE3 530 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 FBXO18Q8NFZ0 1043 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 hCG_2014768A0A024R1R8 64 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 EIF3CLB5ME19 914 aaKnown RBP16.65■□□□□ 0.26
COL5A1-208ENST00000618395 MCF2P10911 925 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 RSBN1LQ6PCB5 846 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-208ENST00000618395 CALR3Q96L12 384 aaKnown RBP16.65■□□□□ 0.26
COL5A1-208ENST00000618395 EIF3CQ99613 913 aaKnown RBP16.65■□□□□ 0.26
COL5A1-208ENST00000618395 EFHD1Q9BUP0 239 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 TTC4O95801 387 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
COL5A1-208ENST00000618395 ASIC1P78348 528 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 CCDC13Q8IYE1 715 aa16.65■□□□□ 0.26
COL5A1-208ENST00000618395 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
COL5A1-208ENST00000618395 TRIM58Q8NG06 486 aa16.64■□□□□ 0.25
COL5A1-208ENST00000618395 ZRANB1Q9UGI0 708 aa16.64■□□□□ 0.25
COL5A1-208ENST00000618395 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
COL5A1-208ENST00000618395 ERMNQ8TAM6 284 aa16.64■□□□□ 0.25
COL5A1-208ENST00000618395 BAG5Q9UL15 447 aa16.64■□□□□ 0.25
COL5A1-208ENST00000618395 SPZ1Q9BXG8 430 aa16.64■□□□□ 0.25
COL5A1-208ENST00000618395 TUBB6Q9BUF5 446 aa16.64■□□□□ 0.25
COL5A1-208ENST00000618395 FLCNQ8NFG4 579 aa16.63■□□□□ 0.25
COL5A1-208ENST00000618395 CA8P35219 290 aa16.63■□□□□ 0.25
COL5A1-208ENST00000618395 CUL3Q13618 768 aa16.63■□□□□ 0.25
COL5A1-208ENST00000618395 TRIML2Q8N7C3 387 aa16.63■□□□□ 0.25
COL5A1-208ENST00000618395 TEKT1Q969V4 418 aa16.63■□□□□ 0.25
COL5A1-208ENST00000618395 ARHGAP10A1A4S6 786 aa16.63■□□□□ 0.25
COL5A1-208ENST00000618395 ZNF354CQ86Y25 554 aa16.63■□□□□ 0.25
COL5A1-208ENST00000618395 KIF2CQ99661 725 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms