RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 HSPA1LP34931 641 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 WTAPQ15007 396 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 CPLX2Q6PUV4 134 aaKnown RBP14.44□□□□□ -0.1
CIITA-212ENST00000618207 ERICH2A1L162 156 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 HIBADHP31937 336 aaKnown RBP14.44□□□□□ -0.1
CIITA-212ENST00000618207 GUCY1A2P33402 732 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 ALX1Q15699 326 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 MYSM1Q5VVJ2 828 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 KRT40Q6A162 431 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 TTC12Q9H892 705 aaPredicted RBP14.44□□□□□ -0.1
CIITA-212ENST00000618207 ZNF804BA4D1E1 1349 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 RRP9O43818 475 aaKnown RBP14.43□□□□□ -0.1
CIITA-212ENST00000618207 NFIXQ14938 502 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 FAM217BQ9NTX9 383 aaPredicted RBP14.43□□□□□ -0.1
CIITA-212ENST00000618207 CHD4Q14839 1912 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 MYH2Q9UKX2 1941 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 ARAP2Q8WZ64 1704 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 RREB1Q92766 1687 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.43□□□□□ -0.1
CIITA-212ENST00000618207 GNAT2P19087 354 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 ATP2B1P20020 1258 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 MECOMQ03112 1051 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 RC3H1Q5TC82 1133 aaKnown RBP14.43□□□□□ -0.1
CIITA-212ENST00000618207 UBAC1Q9BSL1 405 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 KRT23Q9C075 422 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 CCDC39Q9UFE4 941 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 KCNJ14Q9UNX9 436 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 BCORQ6W2J9 1755 aa14.43□□□□□ -0.1
CIITA-212ENST00000618207 KINO60870 393 aaKnown RBP14.42□□□□□ -0.1
CIITA-212ENST00000618207 KIF23Q02241 960 aaPredicted RBP14.42□□□□□ -0.1
CIITA-212ENST00000618207 HSP90AA2PQ14568 343 aaPredicted RBP14.42□□□□□ -0.1
CIITA-212ENST00000618207 SLC10A5Q5PT55 438 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 CNNM2Q9H8M5 875 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 NOL7Q9UMY1 257 aaKnown RBP14.42□□□□□ -0.1
CIITA-212ENST00000618207 USP17L12C9JPN9 530 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 USP17L21D6R901 530 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 SART3Q15020 963 aaKnown RBP14.42□□□□□ -0.1
CIITA-212ENST00000618207 UVSSAQ2YD98 709 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 RIOK1Q9BRS2 568 aaKnown RBP14.42□□□□□ -0.1
CIITA-212ENST00000618207 CBX8Q9HC52 389 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 PNPLA7Q6ZV29 1317 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 MYH13Q9UKX3 1938 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 DOCK2Q92608 1830 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 NTRK3Q16288 839 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 CNBD1Q8NA66 436 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 LINC00301Q8NCQ3 95 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 FAM200AQ8TCP9 573 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 STAG1Q8WVM7 1258 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 PIBF1Q8WXW3 757 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 SDF4Q9BRK5 362 aa14.42□□□□□ -0.1
CIITA-212ENST00000618207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.42□□□□□ -0.1
CIITA-212ENST00000618207 SPTLC2O15270 562 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 CDKL5O76039 1030 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 ZNF165P49910 485 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 NDUFA8P51970 172 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 SSRP1Q08945 709 aaKnown RBP14.41□□□□□ -0.1
CIITA-212ENST00000618207 SNW1Q13573 536 aaKnown RBP14.41□□□□□ -0.1
CIITA-212ENST00000618207 TRIM29Q14134 588 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 C17orf53Q8N3J3 647 aaPredicted RBP14.41□□□□□ -0.1
CIITA-212ENST00000618207 ZKSCAN5Q9Y2L8 839 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 CASZ1Q86V15 1759 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 MYH15Q9Y2K3 1946 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 CYP2D6P10635 497 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 TM4SF1P30408 202 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 RTN1Q16799 776 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 ISM2Q6H9L7 571 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 FBXO33Q7Z6M2 555 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 TNKSO95271 1327 aa14.41□□□□□ -0.1
CIITA-212ENST00000618207 NMT2O60551 498 aa14.4□□□□□ -0.1
CIITA-212ENST00000618207 TRIM37O94972 964 aa14.4□□□□□ -0.1
CIITA-212ENST00000618207 FAM47AQ5JRC9 791 aa14.4□□□□□ -0.1
CIITA-212ENST00000618207 SGMS1Q86VZ5 419 aa14.4□□□□□ -0.1
CIITA-212ENST00000618207 NSUN4Q96CB9 384 aaKnown RBP14.4□□□□□ -0.1
CIITA-212ENST00000618207 LIFRP42702 1097 aa14.4□□□□□ -0.1
CIITA-212ENST00000618207 RTEL1Q9NZ71 1219 aa14.4□□□□□ -0.1
CIITA-212ENST00000618207 MTMR7Q9Y216 660 aa14.4□□□□□ -0.1
CIITA-212ENST00000618207 LAMB2P55268 1798 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 BTBD18B2RXH4 712 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 BIN1O00499 593 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 SPECC1Q5M775 1068 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 ANO1Q5XXA6 986 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 C11orf57Q6ZUT1 292 aaPredicted RBP14.39□□□□□ -0.11
CIITA-212ENST00000618207 DZIP1Q86YF9 867 aaKnown RBP14.39□□□□□ -0.11
CIITA-212ENST00000618207 ZNF654Q8IZM8 581 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 MRPS27Q92552 414 aaKnown RBP14.39□□□□□ -0.11
CIITA-212ENST00000618207 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
CIITA-212ENST00000618207 CICQ96RK0 1608 aaPredicted RBP14.39□□□□□ -0.11
CIITA-212ENST00000618207 FAM160A1Q05DH4 1040 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 DRC7Q8IY82 874 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 ESR2Q92731 530 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 QTRT2Q9H974 415 aaKnown RBP14.39□□□□□ -0.11
CIITA-212ENST00000618207 SPATA31A6Q5VVP1 1343 aa14.39□□□□□ -0.11
CIITA-212ENST00000618207 C4AP0C0L4 1744 aa14.38□□□□□ -0.11
CIITA-212ENST00000618207 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
CIITA-212ENST00000618207 DIXDC1Q155Q3 683 aa14.38□□□□□ -0.11
CIITA-212ENST00000618207 ANKRD2Q9GZV1 360 aa14.38□□□□□ -0.11
CIITA-212ENST00000618207 WDHD1O75717 1129 aaPredicted RBP14.38□□□□□ -0.11
CIITA-212ENST00000618207 GRIK5Q16478 980 aa14.38□□□□□ -0.11
CIITA-212ENST00000618207 CTR9Q6PD62 1173 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms