RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 ABL1P00519 1130 aa12.46□□□□□ -0.42
POLR2A-209ENST00000617998 FAM160B1Q5W0V3 765 aa12.46□□□□□ -0.42
POLR2A-209ENST00000617998 HTATIP2Q9BUP3 242 aa12.46□□□□□ -0.42
POLR2A-209ENST00000617998 RNF17Q9BXT8 1623 aaKnown RBP12.46□□□□□ -0.42
POLR2A-209ENST00000617998 ADCY10Q96PN6 1610 aa12.46□□□□□ -0.42
POLR2A-209ENST00000617998 ANGEL2Q5VTE6 544 aaKnown RBP12.46□□□□□ -0.42
POLR2A-209ENST00000617998 SEPT14Q6ZU15 432 aa12.46□□□□□ -0.42
POLR2A-209ENST00000617998 GCNAQ96QF7 691 aa12.46□□□□□ -0.42
POLR2A-209ENST00000617998 KLF18A0A0U1RQI7 1052 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 ACTN1P12814 892 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 SLC17A8Q8NDX2 589 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 RNF34Q969K3 372 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 GPR101Q96P66 508 aaPredicted RBP12.45□□□□□ -0.42
POLR2A-209ENST00000617998 GNAT1P11488 350 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 HOXC10Q9NYD6 342 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 GDF11O95390 407 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
POLR2A-209ENST00000617998 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 POLIQ9UNA4 740 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 CCDC17Q96LX7 622 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 ADPGKQ9BRR6 497 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 ASXL1Q8IXJ9 1541 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 PRDM1O75626 825 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 ASNSP08243 561 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 RC3H1Q5TC82 1133 aaKnown RBP12.45□□□□□ -0.42
POLR2A-209ENST00000617998 KRT79Q5XKE5 535 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 EEPD1Q7L9B9 569 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 SPICE1Q8N0Z3 855 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 TRPA1O75762 1119 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 STYK1Q6J9G0 422 aa12.45□□□□□ -0.42
POLR2A-209ENST00000617998 ARPP21Q9UBL0 812 aaPredicted RBP12.45□□□□□ -0.42
POLR2A-209ENST00000617998 CCDC40Q4G0X9 1142 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 KCNQ3O43525 872 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 SRGAP2BP0DMP2 458 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 HMGN5P82970 282 aaKnown RBP12.44□□□□□ -0.42
POLR2A-209ENST00000617998 ATP8B2P98198 1209 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 SCARF1Q14162 830 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 TMEM232C9JQI7 657 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 SP8Q8IXZ3 490 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 PI4KBQ9UBF8 816 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 ABCC3O15438 1527 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 UQCRHLA0A096LP55 91 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 MAP1SQ66K74 1059 aaPredicted RBP12.44□□□□□ -0.42
POLR2A-209ENST00000617998 VPS36Q86VN1 386 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 TRIM47Q96LD4 638 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 GREM2Q9H772 168 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 FIBPO43427 364 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 ZKSCAN3Q9BRR0 538 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 SLITRK6Q9H5Y7 841 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 SEC31BQ9NQW1 1179 aa12.44□□□□□ -0.42
POLR2A-209ENST00000617998 RBM28Q9NW13 759 aaKnown RBP12.44□□□□□ -0.42
POLR2A-209ENST00000617998 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
POLR2A-209ENST00000617998 ERLIN2O94905 339 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 CTNNA2P26232 953 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 YARSP54577 528 aaKnown RBP12.43□□□□□ -0.42
POLR2A-209ENST00000617998 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
POLR2A-209ENST00000617998 SWAP70Q9UH65 585 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 RNF123Q5XPI4 1314 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
POLR2A-209ENST00000617998 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 USP17L5A8MUK1 530 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 PROCA1Q8NCQ7 364 aaPredicted RBP12.43□□□□□ -0.42
POLR2A-209ENST00000617998 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
POLR2A-209ENST00000617998 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 CRKP46108 304 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 OTUD6AQ7L8S5 288 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 SUGCTQ9HAC7 445 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 BSDC1Q9NW68 430 aaPredicted RBP12.43□□□□□ -0.42
POLR2A-209ENST00000617998 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 PTCH1Q13635 1447 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 TFAP4Q01664 338 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 DGKZQ13574 1117 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 SUSD4Q5VX71 490 aa12.43□□□□□ -0.42
POLR2A-209ENST00000617998 HEG1Q9ULI3 1381 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 M0R2C6 588 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 RPS12P25398 132 aaKnown RBP12.42□□□□□ -0.42
POLR2A-209ENST00000617998 KRT85P78386 507 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 FKBP15Q5T1M5 1219 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 CAGE1Q8TC20 777 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 CYP2B6P20813 491 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 RASSF7Q02833 373 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 FNBP1Q96RU3 617 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 NRBP2Q9NSY0 501 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 DPYSL4O14531 572 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 HS1BP3Q53T59 392 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 TCOF1Q13428 1488 aaKnown RBP12.42□□□□□ -0.42
POLR2A-209ENST00000617998 NFKBIBQ15653 356 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 AKT3Q9Y243 479 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 NOP58Q9Y2X3 529 aaKnown RBP12.42□□□□□ -0.42
POLR2A-209ENST00000617998 NEURL1BA8MQ27 555 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 GTF2A2P52657 109 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 TRPC3Q13507 836 aa12.42□□□□□ -0.42
POLR2A-209ENST00000617998 NEFHP12036 1026 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 SSH2Q76I76 1423 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms