RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 FAM135BQ49AJ0 1406 aa17.42■□□□□ 0.38
PTPRT-210ENST00000617474 SYNMO15061 1565 aa17.42■□□□□ 0.38
PTPRT-210ENST00000617474 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
PTPRT-210ENST00000617474 TTC31Q49AM3 519 aaPredicted RBP17.42■□□□□ 0.38
PTPRT-210ENST00000617474 CEP57Q86XR8 500 aa17.42■□□□□ 0.38
PTPRT-210ENST00000617474 FAM76AQ8TAV0 307 aa17.42■□□□□ 0.38
PTPRT-210ENST00000617474 KIF2CQ99661 725 aa17.42■□□□□ 0.38
PTPRT-210ENST00000617474 DBNLQ9UJU6 430 aaKnown RBP17.42■□□□□ 0.38
PTPRT-210ENST00000617474 GBP2P32456 591 aaPredicted RBP17.42■□□□□ 0.38
PTPRT-210ENST00000617474 SYCP3Q8IZU3 236 aa17.42■□□□□ 0.38
PTPRT-210ENST00000617474 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
PTPRT-210ENST00000617474 NBPF5PQ86XG9 351 aaPredicted RBP17.41■□□□□ 0.38
PTPRT-210ENST00000617474 PFKFB2O60825 505 aa17.41■□□□□ 0.38
PTPRT-210ENST00000617474 GCOM1H8Y6P7 765 aaPredicted RBP17.4■□□□□ 0.38
PTPRT-210ENST00000617474 MYZAPP0CAP1 466 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 ATP6V1AP38606 617 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 TDRD7Q8NHU6 1098 aaKnown RBP17.4■□□□□ 0.38
PTPRT-210ENST00000617474 PPP1R1BQ9UD71 204 aaPredicted RBP17.4■□□□□ 0.38
PTPRT-210ENST00000617474 ZNF532Q9HCE3 1301 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 PLEKHG3A1L390 1219 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 GNAT2P19087 354 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 CFAP58Q5T655 872 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 CADPS2Q86UW7 1296 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
PTPRT-210ENST00000617474 UIMC1Q96RL1 719 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 NOC4LQ9BVI4 516 aaKnown RBP17.4■□□□□ 0.38
PTPRT-210ENST00000617474 SLC52A2Q9HAB3 445 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 CALRP27797 417 aaKnown RBP17.4■□□□□ 0.38
PTPRT-210ENST00000617474 HPDP32754 393 aaPredicted RBP17.4■□□□□ 0.38
PTPRT-210ENST00000617474 CETN2P41208 172 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 GNAQP50148 359 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 PICALMQ13492 652 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 NAA30Q147X3 362 aaPredicted RBP17.4■□□□□ 0.38
PTPRT-210ENST00000617474 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 DSCC1Q9BVC3 393 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
PTPRT-210ENST00000617474 FAM170AA1A519 330 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 BTBD18B2RXH4 712 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 CSGALNACT2Q8N6G5 542 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 TBCAO75347 108 aaKnown RBP17.39■□□□□ 0.37
PTPRT-210ENST00000617474 FGAP02671 866 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 PDIA3P30101 505 aaKnown RBP17.39■□□□□ 0.37
PTPRT-210ENST00000617474 SF3A3Q12874 501 aaKnown RBP eCLIP17.39■□□□□ 0.376e-28■■■■■ 103.8
PTPRT-210ENST00000617474 KRT79Q5XKE5 535 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 TTF2Q9UNY4 1162 aaKnown RBP17.39■□□□□ 0.37
PTPRT-210ENST00000617474 PDE4DQ08499 809 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 CALM1P0DP23 149 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 CALM2P0DP24 149 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 CALM3P0DP25 149 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 AFAP1L1Q8TED9 768 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 TAOK3Q9H2K8 898 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 TBX22Q9Y458 520 aa17.39■□□□□ 0.37
PTPRT-210ENST00000617474 COBLO75128 1261 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 IL2RBP14784 551 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 CETN1Q12798 172 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 ZSCAN26Q16670 478 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 PPP2R2CQ9Y2T4 447 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 PCDHA5Q9Y5H7 936 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
PTPRT-210ENST00000617474 KRT13P13646 458 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 TTC38Q5R3I4 469 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 CUL5Q93034 780 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 ZNF274Q96GC6 653 aaPredicted RBP17.38■□□□□ 0.37
PTPRT-210ENST00000617474 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
PTPRT-210ENST00000617474 SAMM50Q9Y512 469 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 SEC31AO94979 1220 aaKnown RBP17.38■□□□□ 0.37
PTPRT-210ENST00000617474 PAK1Q13153 545 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 CYP26C1Q6V0L0 522 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 TTLL7Q6ZT98 887 aa17.38■□□□□ 0.37
PTPRT-210ENST00000617474 BICDL2A1A5D9 508 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 FBXO18Q8NFZ0 1043 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 TRAF5O00463 557 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 DDX17Q92841 729 aaKnown RBP17.37■□□□□ 0.37
PTPRT-210ENST00000617474 C6orf50Q9HD87 102 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 ARHGEF10O15013 1369 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 NDUFAB1O14561 156 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 TUBBP07437 444 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 UTP14CQ5TAP6 766 aaKnown RBP17.37■□□□□ 0.37
PTPRT-210ENST00000617474 SELENOOQ9BVL4 669 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 RAPGEF1Q13905 1077 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 JAKMIP2Q96AA8 810 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 NLRP3Q96P20 1036 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 PAIP2Q9BPZ3 127 aaKnown RBP17.37■□□□□ 0.37
PTPRT-210ENST00000617474 TMOD2Q9NZR1 351 aa17.37■□□□□ 0.37
PTPRT-210ENST00000617474 IFI16Q16666 785 aaKnown RBP17.36■□□□□ 0.37
PTPRT-210ENST00000617474 TMTC1Q8IUR5 882 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 RGS22Q8NE09 1264 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 SELENOSQ9BQE4 189 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 TUBB4BP68371 445 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 CPLX4Q7Z7G2 160 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 NSUN7Q8NE18 718 aaKnown RBP17.36■□□□□ 0.37
PTPRT-210ENST00000617474 TMEM110-MUSTN1A8MSY1 372 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 DNAJC10Q8IXB1 793 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
PTPRT-210ENST00000617474 POTEJP0CG39 1038 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 CMA1P23946 247 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 HAUS7Q99871 368 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 GOLGA6CA6NDK9 693 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 GOLGA6DP0CG33 693 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms