RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 MBD4O95243 580 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 BAG3O95817 575 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 ZNF280AP59817 542 aaPredicted RBP24.27■■□□□ 1.48
SDHA-220ENST00000617470 ST3GAL1Q11201 340 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 ADAMTSL1Q8N6G6 1762 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 GAKO14976 1311 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 TOB2Q14106 344 aaPredicted RBP24.27■■□□□ 1.48
SDHA-220ENST00000617470 ZDHHC15Q96MV8 337 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 NEK1Q96PY6 1258 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 ARMT1Q9H993 441 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 TPCN1Q9ULQ1 816 aa24.27■■□□□ 1.48
SDHA-220ENST00000617470 ME3Q16798 604 aa24.26■■□□□ 1.47
SDHA-220ENST00000617470 ZNF526Q8TF50 670 aaPredicted RBP24.26■■□□□ 1.47
SDHA-220ENST00000617470 GPR75-ASB3A0A0A6YYF3 556 aa24.25■■□□□ 1.47
SDHA-220ENST00000617470 GPAA1O43292 621 aa24.25■■□□□ 1.47
SDHA-220ENST00000617470 MMP14P50281 582 aa24.25■■□□□ 1.47
SDHA-220ENST00000617470 LCORLQ8N3X6 602 aa24.25■■□□□ 1.47
SDHA-220ENST00000617470 L3MBTL3Q96JM7 780 aaPredicted RBP24.25■■□□□ 1.47
SDHA-220ENST00000617470 GBP4Q96PP9 640 aa24.25■■□□□ 1.47
SDHA-220ENST00000617470 EGFRP00533 1210 aa24.25■■□□□ 1.47
SDHA-220ENST00000617470 APOBEC3HQ6NTF7 200 aaKnown RBP24.25■■□□□ 1.47
SDHA-220ENST00000617470 PRMT6Q96LA8 375 aaPredicted RBP24.25■■□□□ 1.47
SDHA-220ENST00000617470 ZSCAN31Q96LW9 406 aaPredicted RBP24.25■■□□□ 1.47
SDHA-220ENST00000617470 SPDYE2BA6NHP3 402 aa24.24■■□□□ 1.47
SDHA-220ENST00000617470 SPDYE6P0CI01 402 aa24.24■■□□□ 1.47
SDHA-220ENST00000617470 KIF4BQ2VIQ3 1234 aa24.24■■□□□ 1.47
SDHA-220ENST00000617470 RIOK1Q9BRS2 568 aaKnown RBP24.24■■□□□ 1.47
SDHA-220ENST00000617470 HACL1Q9UJ83 578 aa24.24■■□□□ 1.47
SDHA-220ENST00000617470 BAG4O95429 457 aaKnown RBP24.23■■□□□ 1.47
SDHA-220ENST00000617470 SH3RF3Q8TEJ3 882 aaPredicted RBP24.23■■□□□ 1.47
SDHA-220ENST00000617470 SH2B1Q9NRF2 756 aaPredicted RBP24.23■■□□□ 1.47
SDHA-220ENST00000617470 USP40Q9NVE5 1235 aa24.23■■□□□ 1.47
SDHA-220ENST00000617470 DDX11L8A8MPP1 907 aa24.23■■□□□ 1.47
SDHA-220ENST00000617470 NBPF9Q3BBW0 867 aa24.23■■□□□ 1.47
SDHA-220ENST00000617470 TRPM4Q8TD43 1214 aa24.23■■□□□ 1.47
SDHA-220ENST00000617470 TDRD3Q9H7E2 651 aaKnown RBP24.23■■□□□ 1.47
SDHA-220ENST00000617470 WNT10BO00744 389 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 BRD1O95696 1058 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 FGAP02671 866 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 ADARB2Q9NS39 739 aaKnown RBP24.22■■□□□ 1.47
SDHA-220ENST00000617470 E7EWF7 191 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 PLCG2P16885 1265 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 PPP4CP60510 307 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 CDC42EP5Q6NZY7 148 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 CCDC83Q8IWF9 413 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 TEX11Q8IYF3 940 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 MTMR14Q8NCE2 650 aa24.22■■□□□ 1.47
SDHA-220ENST00000617470 STRBPQ96SI9 672 aaKnown RBP24.22■■□□□ 1.47
SDHA-220ENST00000617470 CLRN2A0PK11 232 aa24.21■■□□□ 1.47
SDHA-220ENST00000617470 IQCA1LA6NCM1 817 aa24.21■■□□□ 1.47
SDHA-220ENST00000617470 MYO1BO43795 1136 aa24.21■■□□□ 1.47
SDHA-220ENST00000617470 ANKRD1Q15327 319 aa24.21■■□□□ 1.47
SDHA-220ENST00000617470 NECAB1Q8N987 351 aa24.21■■□□□ 1.47
SDHA-220ENST00000617470 CRNKL1Q9BZJ0 848 aaKnown RBP24.21■■□□□ 1.47
SDHA-220ENST00000617470 SLC4A4Q9Y6R1 1079 aa24.21■■□□□ 1.47
SDHA-220ENST00000617470 APPP05067 770 aa24.2■■□□□ 1.46
SDHA-220ENST00000617470 EPHX2P34913 555 aa24.2■■□□□ 1.46
SDHA-220ENST00000617470 DEKP35659 375 aaKnown RBP24.2■■□□□ 1.46
SDHA-220ENST00000617470 PRKAB2O43741 272 aa24.2■■□□□ 1.46
SDHA-220ENST00000617470 CACNB3P54284 484 aa24.2■■□□□ 1.46
SDHA-220ENST00000617470 RHBDL3P58872 404 aa24.2■■□□□ 1.46
SDHA-220ENST00000617470 CERS3Q8IU89 383 aa24.2■■□□□ 1.46
SDHA-220ENST00000617470 RRAGCQ9HB90 399 aa24.2■■□□□ 1.46
SDHA-220ENST00000617470 EXOSC10Q01780 885 aaKnown RBP24.19■■□□□ 1.46
SDHA-220ENST00000617470 SDR42E1Q8WUS8 393 aa24.19■■□□□ 1.46
SDHA-220ENST00000617470 ZBED3Q96IU2 234 aaPredicted RBP24.19■■□□□ 1.46
SDHA-220ENST00000617470 VEZTQ9HBM0 779 aa24.19■■□□□ 1.46
SDHA-220ENST00000617470 TMOD2Q9NZR1 351 aa24.19■■□□□ 1.46
SDHA-220ENST00000617470 CTNNA3Q9UI47 895 aa24.19■■□□□ 1.46
SDHA-220ENST00000617470 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.19■■□□□ 1.46
SDHA-220ENST00000617470 DTNBO60941 627 aa24.18■■□□□ 1.46
SDHA-220ENST00000617470 USP5P45974 858 aa24.18■■□□□ 1.46
SDHA-220ENST00000617470 PICALMQ13492 652 aa24.18■■□□□ 1.46
SDHA-220ENST00000617470 TGFBRAP1Q8WUH2 860 aa24.18■■□□□ 1.46
SDHA-220ENST00000617470 POTECB2RU33 542 aa24.18■■□□□ 1.46
SDHA-220ENST00000617470 EAPPQ56P03 285 aaPredicted RBP24.18■■□□□ 1.46
SDHA-220ENST00000617470 Q6ZUG5 572 aa24.18■■□□□ 1.46
SDHA-220ENST00000617470 DHX32Q7L7V1 743 aaKnown RBP24.18■■□□□ 1.46
SDHA-220ENST00000617470 ZNF70Q9UC06 446 aaPredicted RBP24.18■■□□□ 1.46
SDHA-220ENST00000617470 ASTN2O75129 1339 aaPredicted RBP24.17■■□□□ 1.46
SDHA-220ENST00000617470 TRAK2O60296 914 aa24.17■■□□□ 1.46
SDHA-220ENST00000617470 HMGB1P09429 215 aaKnown RBP24.17■■□□□ 1.46
SDHA-220ENST00000617470 GNAT2P19087 354 aa24.17■■□□□ 1.46
SDHA-220ENST00000617470 HIRAP54198 1017 aaPredicted RBP24.17■■□□□ 1.46
SDHA-220ENST00000617470 HAND2P61296 217 aa24.17■■□□□ 1.46
SDHA-220ENST00000617470 GSE1Q14687 1217 aa24.17■■□□□ 1.46
SDHA-220ENST00000617470 TAF1DQ9H5J8 278 aaPredicted RBP24.17■■□□□ 1.46
SDHA-220ENST00000617470 WDR90Q96KV7 1748 aa24.17■■□□□ 1.46
SDHA-220ENST00000617470 FOXD4L5Q5VV16 416 aaPredicted RBP24.16■■□□□ 1.46
SDHA-220ENST00000617470 MAPKAPK5Q8IW41 473 aa24.16■■□□□ 1.46
SDHA-220ENST00000617470 FOXD4L4Q8WXT5 416 aaPredicted RBP24.16■■□□□ 1.46
SDHA-220ENST00000617470 CHAMP1Q96JM3 812 aa24.16■■□□□ 1.46
SDHA-220ENST00000617470 LRRC2Q9BYS8 371 aa24.16■■□□□ 1.46
SDHA-220ENST00000617470 VEGFAP15692 232 aaPredicted RBP24.16■■□□□ 1.46
SDHA-220ENST00000617470 SPDYE2Q495Y8 402 aa24.16■■□□□ 1.46
SDHA-220ENST00000617470 NBPF3Q9H094 633 aa24.16■■□□□ 1.46
SDHA-220ENST00000617470 NMRK2Q9NPI5 230 aa24.16■■□□□ 1.46
SDHA-220ENST00000617470 SMC3Q9UQE7 1217 aa24.16■■□□□ 1.46
SDHA-220ENST00000617470 TCP10L2B9ZVM9 353 aa24.15■■□□□ 1.46
SDHA-220ENST00000617470 NFIAQ12857 509 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms