RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
PCDHGC3-204ENST00000617222 FAM83AQ86UY5 434 aa18.72■□□□□ 0.59
PCDHGC3-204ENST00000617222 FAM151AQ8WW52 585 aa18.72■□□□□ 0.59
PCDHGC3-204ENST00000617222 ESYT1Q9BSJ8 1104 aa18.72■□□□□ 0.59
PCDHGC3-204ENST00000617222 MYH7P12883 1935 aa18.72■□□□□ 0.59
PCDHGC3-204ENST00000617222 RAD50Q92878 1312 aa18.72■□□□□ 0.59
PCDHGC3-204ENST00000617222 CNTNAP1P78357 1384 aa18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 GSG1L2A8MUP6 293 aa18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 VPS53Q5VIR6 699 aa18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 PRAMEF18Q5VWM3 479 aa18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 TMEM39BQ9GZU3 492 aa18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 OSBPL5Q9H0X9 879 aaPredicted RBP18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 DCP1AQ9NPI6 582 aaPredicted RBP18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 ATP8A2Q9NTI2 1148 aa18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 SAP30BPQ9UHR5 308 aaKnown RBP18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 FLT1P17948 1338 aa18.71■□□□□ 0.59
PCDHGC3-204ENST00000617222 MKRN1Q9UHC7 482 aaKnown RBP18.7■□□□□ 0.58
PCDHGC3-204ENST00000617222 AK9Q5TCS8 1911 aa18.7■□□□□ 0.58
PCDHGC3-204ENST00000617222 TOMM70O94826 608 aa18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 HSPD1P10809 573 aaKnown RBP18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 SH3BP5LQ7L8J4 393 aa18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 CDAN1Q8IWY9 1227 aa18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 IFNL3Q8IZI9 196 aa18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 DDRGK1Q96HY6 314 aa18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 PALD1Q9ULE6 856 aa18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 PPP2R3BQ9Y5P8 575 aa18.69■□□□□ 0.58
PCDHGC3-204ENST00000617222 DDTLA6NHG4 134 aaPredicted RBP18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 TRAF5O00463 557 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 FOXP2O15409 715 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 SLC4A8Q2Y0W8 1093 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 GIMAP6Q6P9H5 292 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 KIAA1211Q6ZU35 1233 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 SMC1BQ8NDV3 1235 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 RBM46Q8TBY0 533 aaKnown RBP18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 TEPSINQ96N21 525 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 EPB41L4AQ9HCS5 686 aaPredicted RBP18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 MCM9Q9NXL9 1143 aa18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
PCDHGC3-204ENST00000617222 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
PCDHGC3-204ENST00000617222 USP17L21D6R901 530 aa18.67■□□□□ 0.58
PCDHGC3-204ENST00000617222 ITGBL1O95965 494 aaPredicted RBP18.67■□□□□ 0.58
PCDHGC3-204ENST00000617222 POLR3DP05423 398 aaPredicted RBP18.67■□□□□ 0.58
PCDHGC3-204ENST00000617222 TDO2P48775 406 aa18.67■□□□□ 0.58
PCDHGC3-204ENST00000617222 FMR1Q06787 632 aaKnown RBP eCLIP18.67■□□□□ 0.58
PCDHGC3-204ENST00000617222 NBPF12Q5TAG4 269 aaPredicted RBP18.67■□□□□ 0.58
PCDHGC3-204ENST00000617222 FGAP02671 866 aa18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 CYP2D6P10635 497 aa18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 PTH1RQ03431 593 aa18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 ALX1Q15699 326 aa18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 CTR9Q6PD62 1173 aa18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 NAPBQ9H115 298 aa18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 DHX36Q9H2U1 1008 aaKnown RBP18.66■□□□□ 0.58
PCDHGC3-204ENST00000617222 CYP2D7A0A087X1C5 515 aa18.65■□□□□ 0.58
PCDHGC3-204ENST00000617222 PLCD1P51178 756 aa18.65■□□□□ 0.58
PCDHGC3-204ENST00000617222 SUPT20HL1Q3ZLR7 823 aa18.65■□□□□ 0.58
PCDHGC3-204ENST00000617222 TTC6Q86TZ1 520 aa18.65■□□□□ 0.58
PCDHGC3-204ENST00000617222 CSRNP1Q96S65 589 aa18.65■□□□□ 0.58
PCDHGC3-204ENST00000617222 ANO2Q9NQ90 1003 aa18.65■□□□□ 0.58
PCDHGC3-204ENST00000617222 MINDY4BA8MYZ0 360 aa18.64■□□□□ 0.57
PCDHGC3-204ENST00000617222 HLA-DOAP06340 250 aa18.64■□□□□ 0.57
PCDHGC3-204ENST00000617222 SBK1Q52WX2 424 aa18.64■□□□□ 0.57
PCDHGC3-204ENST00000617222 AMOTL1Q8IY63 956 aa18.64■□□□□ 0.57
PCDHGC3-204ENST00000617222 LSG1Q9H089 658 aaKnown RBP18.64■□□□□ 0.57
PCDHGC3-204ENST00000617222 PI4KBQ9UBF8 816 aa18.64■□□□□ 0.57
PCDHGC3-204ENST00000617222 POLR2AP24928 1970 aaKnown RBP18.64■□□□□ 0.57
PCDHGC3-204ENST00000617222 SLURP2P0DP57 97 aa18.63■□□□□ 0.57
PCDHGC3-204ENST00000617222 EVX2Q03828 476 aa18.63■□□□□ 0.57
PCDHGC3-204ENST00000617222 C8orf34Q49A92 452 aa18.63■□□□□ 0.57
PCDHGC3-204ENST00000617222 C12orf60Q5U649 245 aa18.63■□□□□ 0.57
PCDHGC3-204ENST00000617222 MIGA2Q7L4E1 593 aa18.63■□□□□ 0.57
PCDHGC3-204ENST00000617222 ZNF408Q9H9D4 720 aa18.63■□□□□ 0.57
PCDHGC3-204ENST00000617222 ARPP21Q9UBL0 812 aaPredicted RBP18.63■□□□□ 0.57
PCDHGC3-204ENST00000617222 ATRNL1Q5VV63 1379 aa18.63■□□□□ 0.57
PCDHGC3-204ENST00000617222 SMIM22K7EJ46 135 aa18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 NF2P35240 595 aa18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 FSTL1Q12841 308 aa18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 FOXP4Q8IVH2 680 aaPredicted RBP18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 MAP4K1Q92918 833 aa18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 HOOK2Q96ED9 719 aa18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 U3KPZ7 1027 aaPredicted RBP18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 ECM29Q5VYK3 1845 aa18.62■□□□□ 0.57
PCDHGC3-204ENST00000617222 COL2A1P02458 1487 aaPredicted RBP18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 REC8O95072 547 aa18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 CELF2O95319 508 aaKnown RBP18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 PPARAQ07869 468 aa18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 PRKG1Q13976 671 aa18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 STK11IPQ8N1F8 1099 aa18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 CRACR2BQ8N4Y2 399 aaPredicted RBP18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 DYNLL2Q96FJ2 89 aa18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 FZD1Q9UP38 647 aa18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 RBM8AQ9Y5S9 174 aaKnown RBP18.61■□□□□ 0.57
PCDHGC3-204ENST00000617222 PASKQ96RG2 1323 aa18.6■□□□□ 0.57
PCDHGC3-204ENST00000617222 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
PCDHGC3-204ENST00000617222 HAND2P61296 217 aa18.6■□□□□ 0.57
PCDHGC3-204ENST00000617222 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms