RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 LDHBP07195 334 aaKnown RBP9.16□□□□□ -0.94
NEK3-207ENST00000617054 HOXA10P31260 410 aaPredicted RBP9.16□□□□□ -0.94
NEK3-207ENST00000617054 GTF2IP78347 998 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 NFXL1Q6ZNB6 911 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 ZNF804AQ7Z570 1209 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 CACNA1SQ13698 1873 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 IFIT3O14879 490 aaKnown RBP9.16□□□□□ -0.94
NEK3-207ENST00000617054 USP17L8P0C7I0 530 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 FDPSP14324 419 aaKnown RBP9.16□□□□□ -0.94
NEK3-207ENST00000617054 TMEM67Q5HYA8 995 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 CTR9Q6PD62 1173 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 IGDCC4Q8TDY8 1250 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 SH3RF3Q8TEJ3 882 aaPredicted RBP9.16□□□□□ -0.94
NEK3-207ENST00000617054 PHKBQ93100 1093 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 AIFM3Q96NN9 605 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 DOCK2Q92608 1830 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 KLRG2A4D1S0 409 aaPredicted RBP9.16□□□□□ -0.94
NEK3-207ENST00000617054 H3BQV1 296 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 RANBP6O60518 1105 aaKnown RBP9.16□□□□□ -0.94
NEK3-207ENST00000617054 NMT2O60551 498 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 CDC27P30260 824 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 FAM47AQ5JRC9 791 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 MFSD14BQ5SR56 506 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 IFFO2Q5TF58 517 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 CRAMP1Q96RY5 1269 aa9.16□□□□□ -0.94
NEK3-207ENST00000617054 FTOQ9C0B1 505 aaKnown RBP eCLIP9.16□□□□□ -0.94
NEK3-207ENST00000617054 ALX1Q15699 326 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 C2CD5Q86YS7 1000 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 DBNDD1Q9H9R9 158 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 DCP1AQ9NPI6 582 aaPredicted RBP9.15□□□□□ -0.94
NEK3-207ENST00000617054 SAP30BPQ9UHR5 308 aaKnown RBP9.15□□□□□ -0.94
NEK3-207ENST00000617054 ANGEL1Q9UNK9 670 aaKnown RBP9.15□□□□□ -0.94
NEK3-207ENST00000617054 GNAT2P19087 354 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 MPNDQ8N594 471 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 TGFBRAP1Q8WUH2 860 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 ZNF274Q96GC6 653 aaPredicted RBP9.15□□□□□ -0.94
NEK3-207ENST00000617054 ZMYND15Q9H091 742 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 LY9Q9HBG7 655 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 MCM9Q9NXL9 1143 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 ATP6V0A2Q9Y487 856 aa9.15□□□□□ -0.94
NEK3-207ENST00000617054 SH2B2O14492 632 aaPredicted RBP9.14□□□□□ -0.95
NEK3-207ENST00000617054 DPP8Q6V1X1 898 aaPredicted RBP9.14□□□□□ -0.95
NEK3-207ENST00000617054 DYNLL2Q96FJ2 89 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 TMEM63CQ9P1W3 806 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 ANKRD31Q8N7Z5 1873 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 CPLX1O14810 134 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 NPR1P16066 1061 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 PDE6BP35913 854 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 SCNN1DP51172 638 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 KLHL40Q2TBA0 621 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 APOA5Q6Q788 366 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 MAPKAPK5Q8IW41 473 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 SP8Q8IXZ3 490 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 NUP133Q8WUM0 1156 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 ZC3H12CQ9C0D7 883 aaKnown RBP9.14□□□□□ -0.95
NEK3-207ENST00000617054 STK32BQ9NY57 414 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 FLAD1Q8NFF5 587 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 SMARCC2Q8TAQ2 1214 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 WDR66Q8TBY9 1149 aa9.14□□□□□ -0.95
NEK3-207ENST00000617054 hCG_1642624A0A1W2PR95 340 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 SLURP2P0DP57 97 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 USP5P45974 858 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 METAP2P50579 478 aaKnown RBP eCLIP9.13□□□□□ -0.95
NEK3-207ENST00000617054 SLC44A5Q8NCS7 719 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 FBXO41Q8TF61 875 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 MASTLQ96GX5 879 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 PANK2Q9BZ23 570 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 MTMR7Q9Y216 660 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 PCDHAC2Q9Y5I4 1007 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 CHD4Q14839 1912 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
NEK3-207ENST00000617054 G3V3G9 751 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 H0YIN7 160 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 POLR3DP05423 398 aaPredicted RBP9.13□□□□□ -0.95
NEK3-207ENST00000617054 PLCD1P51178 756 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 SF3B2Q13435 895 aaKnown RBP9.13□□□□□ -0.95
NEK3-207ENST00000617054 SKOR2Q2VWA4 1001 aaPredicted RBP9.13□□□□□ -0.95
NEK3-207ENST00000617054 DCAF8Q5TAQ9 597 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 STAG1Q8WVM7 1258 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
NEK3-207ENST00000617054 CRNKL1Q9BZJ0 848 aaKnown RBP9.13□□□□□ -0.95
NEK3-207ENST00000617054 ORC3Q9UBD5 711 aaPredicted RBP9.13□□□□□ -0.95
NEK3-207ENST00000617054 BAZ2BQ9UIF8 2168 aaKnown RBP9.13□□□□□ -0.95
NEK3-207ENST00000617054 CCDC69A6NI79 296 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 IL1R1P14778 569 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 ALDH1B1P30837 517 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 BTDP43251 543 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 CERS5Q8N5B7 392 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 SLC12A7Q9Y666 1083 aa9.13□□□□□ -0.95
NEK3-207ENST00000617054 SYCE3A1L190 88 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 ZBTB43O43298 467 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 PDCP20941 246 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 ZSCAN23Q3MJ62 389 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 FAM217BQ9NTX9 383 aaPredicted RBP9.12□□□□□ -0.95
NEK3-207ENST00000617054 PPP1R1BQ9UD71 204 aaPredicted RBP9.12□□□□□ -0.95
NEK3-207ENST00000617054 MYH2Q9UKX2 1941 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 GOLGA6L3A6NEY3 463 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 C21orf2O43822 256 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 ZBTB7AO95365 584 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms