RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 GOLGA8FQ08AF8 430 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 GOLGA8DPQ0D2H9 430 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 MORC3Q14149 939 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
GPN1-212ENST00000616939 FOXP4Q8IVH2 680 aaPredicted RBP17.82■□□□□ 0.44
GPN1-212ENST00000616939 RASSF4Q9H2L5 321 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 ADAM21Q9UKJ8 722 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 ANGEL1Q9UNK9 670 aaKnown RBP17.82■□□□□ 0.44
GPN1-212ENST00000616939 LRP6O75581 1613 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 COL18A1P39060 1754 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 SH2B2O14492 632 aaPredicted RBP17.82■□□□□ 0.44
GPN1-212ENST00000616939 ERLIN1O75477 346 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 BMP6P22004 513 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
GPN1-212ENST00000616939 CHMP4BP1P59074 171 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 LONRF3Q496Y0 759 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 HDXQ7Z353 690 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 TIAM2Q8IVF5 1701 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 WDR17Q8IZU2 1322 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 KRI1Q8N9T8 703 aaKnown RBP17.82■□□□□ 0.44
GPN1-212ENST00000616939 CCDC191Q8NCU4 936 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 CWC25Q9NXE8 425 aaPredicted RBP17.82■□□□□ 0.44
GPN1-212ENST00000616939 CDC23Q9UJX2 597 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 A0A1B0GTH6 734 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 ATP5J2-PTCD1G3V325 749 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 H3BQF6 201 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
GPN1-212ENST00000616939 EIF3JO75822 258 aaKnown RBP17.81■□□□□ 0.44
GPN1-212ENST00000616939 FECHP22830 423 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 ERCC5P28715 1186 aaPredicted RBP17.81■□□□□ 0.44
GPN1-212ENST00000616939 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.44
GPN1-212ENST00000616939 NR1I3Q14994 352 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 TTC39AQ5SRH9 613 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 BEND6Q5SZJ8 279 aaPredicted RBP17.81■□□□□ 0.44
GPN1-212ENST00000616939 TTC5Q8N0Z6 440 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 CCDC12Q8WUD4 166 aaPredicted RBP17.81■□□□□ 0.44
GPN1-212ENST00000616939 CCDC34Q96HJ3 373 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.81■□□□□ 0.44
GPN1-212ENST00000616939 GBP3Q9H0R5 595 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 EPC1Q9H2F5 836 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 GJB4Q9NTQ9 266 aa17.81■□□□□ 0.44
GPN1-212ENST00000616939 AKR1B15C9JRZ8 316 aaPredicted RBP17.8■□□□□ 0.44
GPN1-212ENST00000616939 ZNF213O14771 459 aa17.8■□□□□ 0.44
GPN1-212ENST00000616939 POSTNQ15063 836 aa17.8■□□□□ 0.44
GPN1-212ENST00000616939 KANK3Q6NY19 840 aa17.8■□□□□ 0.44
GPN1-212ENST00000616939 PDILTQ8N807 584 aa17.8■□□□□ 0.44
GPN1-212ENST00000616939 ZNF579Q8NAF0 562 aaKnown RBP17.8■□□□□ 0.44
GPN1-212ENST00000616939 RAPGEF4Q8WZA2 1011 aa17.8■□□□□ 0.44
GPN1-212ENST00000616939 ZCCHC17Q9NP64 241 aaKnown RBP17.8■□□□□ 0.44
GPN1-212ENST00000616939 AKAP2Q9Y2D5 859 aa17.8■□□□□ 0.44
GPN1-212ENST00000616939 NFE2L3Q9Y4A8 694 aa17.8■□□□□ 0.44
GPN1-212ENST00000616939 PAPPAQ13219 1627 aa17.8■□□□□ 0.44
GPN1-212ENST00000616939 TATP17735 454 aaPredicted RBP17.79■□□□□ 0.44
GPN1-212ENST00000616939 CDC27P30260 824 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 PLCD1P51178 756 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 HAND2P61296 217 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 SRLQ86TD4 932 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 FAM177A1Q8N128 213 aaPredicted RBP17.79■□□□□ 0.44
GPN1-212ENST00000616939 CCDC51Q96ER9 411 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 TMEM87BQ96K49 555 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 MRPL44Q9H9J2 332 aaKnown RBP17.79■□□□□ 0.44
GPN1-212ENST00000616939 MEGF6O75095 1541 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 ADAMTSL3P82987 1691 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 COL22A1Q8NFW1 1626 aaPredicted RBP17.79■□□□□ 0.44
GPN1-212ENST00000616939 MYO1CO00159 1063 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 SEMA3EO15041 775 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 TRIM29Q14134 588 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 CTR9Q6PD62 1173 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 DCAF5Q96JK2 942 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 TRIM34Q9BYJ4 488 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 ANKZF1Q9H8Y5 726 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 ADGRG1Q9Y653 693 aa17.79■□□□□ 0.44
GPN1-212ENST00000616939 PTPREP23469 700 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 FMR1Q06787 632 aaKnown RBP eCLIP17.78■□□□□ 0.44
GPN1-212ENST00000616939 TRDNQ13061 729 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 NTRK3Q16288 839 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 APOA5Q6Q788 366 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 SPATA20Q8TB22 786 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 WASF1Q92558 559 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 CLIC6Q96NY7 704 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 CEP126Q9P2H0 1117 aa17.78■□□□□ 0.44
GPN1-212ENST00000616939 CCDC9Q9Y3X0 531 aaKnown RBP17.78■□□□□ 0.44
GPN1-212ENST00000616939 KIF5CO60282 957 aa17.77■□□□□ 0.44
GPN1-212ENST00000616939 PBX1P40424 430 aa17.77■□□□□ 0.44
GPN1-212ENST00000616939 ADKP55263 362 aaKnown RBP17.77■□□□□ 0.44
GPN1-212ENST00000616939 ESCO1Q5FWF5 840 aa17.77■□□□□ 0.44
GPN1-212ENST00000616939 LEKR1Q6ZMV7 388 aa17.77■□□□□ 0.44
GPN1-212ENST00000616939 RASGRP2Q7LDG7 609 aa17.77■□□□□ 0.44
GPN1-212ENST00000616939 SGMS1Q86VZ5 419 aa17.77■□□□□ 0.44
GPN1-212ENST00000616939 L1RE1Q9UN81 338 aa17.77■□□□□ 0.44
GPN1-212ENST00000616939 AXIN2Q9Y2T1 843 aa17.77■□□□□ 0.44
GPN1-212ENST00000616939 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.44
GPN1-212ENST00000616939 GPAA1O43292 621 aa17.77■□□□□ 0.43
GPN1-212ENST00000616939 LMAN1P49257 510 aa17.77■□□□□ 0.43
GPN1-212ENST00000616939 WHAMMP3Q1A5X7 153 aa17.77■□□□□ 0.43
GPN1-212ENST00000616939 AIFM3Q96NN9 605 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms