RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 NPM3O75607 178 aaKnown RBP27.02■■□□□ 1.92
CBWD3-212ENST00000616550 IDH1O75874 414 aaKnown RBP27.02■■□□□ 1.92
CBWD3-212ENST00000616550 ZKSCAN4Q969J2 545 aaPredicted RBP27.02■■□□□ 1.92
CBWD3-212ENST00000616550 NDUFB9Q9Y6M9 179 aa27.02■■□□□ 1.92
CBWD3-212ENST00000616550 ALDH1A1P00352 501 aa27.01■■□□□ 1.91
CBWD3-212ENST00000616550 PLCG2P16885 1265 aa27.01■■□□□ 1.91
CBWD3-212ENST00000616550 TEX11Q8IYF3 940 aa27.01■■□□□ 1.91
CBWD3-212ENST00000616550 AATFQ9NY61 560 aaKnown RBP eCLIP27.01■■□□□ 1.91
CBWD3-212ENST00000616550 TBC1D8O95759 1140 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 MAP3K12Q12852 859 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 TTF1Q15361 905 aaPredicted RBP27■■□□□ 1.91
CBWD3-212ENST00000616550 ERO1BQ86YB8 467 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 IFNL1Q8IU54 200 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27■■□□□ 1.91
CBWD3-212ENST00000616550 CNKSR2Q8WXI2 1034 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 OTUD5Q96G74 571 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 ANTXR1Q9H6X2 564 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 ZNF112Q9UJU3 913 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 SNCAIPQ9Y6H5 919 aa27■■□□□ 1.91
CBWD3-212ENST00000616550 DDTLA6NHG4 134 aaPredicted RBP26.99■■□□□ 1.91
CBWD3-212ENST00000616550 CYP7A1P22680 504 aa26.99■■□□□ 1.91
CBWD3-212ENST00000616550 INPP5BP32019 993 aa26.99■■□□□ 1.91
CBWD3-212ENST00000616550 PPP4CP60510 307 aa26.99■■□□□ 1.91
CBWD3-212ENST00000616550 OTUD7BQ6GQQ9 843 aa26.99■■□□□ 1.91
CBWD3-212ENST00000616550 SH3BP5LQ7L8J4 393 aa26.99■■□□□ 1.91
CBWD3-212ENST00000616550 SH3RF3Q8TEJ3 882 aaPredicted RBP26.99■■□□□ 1.91
CBWD3-212ENST00000616550 DCTPP1Q9H773 170 aa26.99■■□□□ 1.91
CBWD3-212ENST00000616550 DOCK2Q92608 1830 aa26.99■■□□□ 1.91
CBWD3-212ENST00000616550 LAMB1P07942 1786 aa26.99■■□□□ 1.91
CBWD3-212ENST00000616550 SPDYE5A6NIY4 337 aa26.98■■□□□ 1.91
CBWD3-212ENST00000616550 GTF2A2P52657 109 aa26.98■■□□□ 1.91
CBWD3-212ENST00000616550 TMED8Q6PL24 325 aaPredicted RBP26.97■■□□□ 1.91
CBWD3-212ENST00000616550 ADGRA1Q86SQ6 560 aa26.97■■□□□ 1.91
CBWD3-212ENST00000616550 MAGEB6Q8N7X4 407 aa26.97■■□□□ 1.91
CBWD3-212ENST00000616550 CRBNQ96SW2 442 aa26.97■■□□□ 1.91
CBWD3-212ENST00000616550 PCDHB15Q9Y5E8 787 aa26.97■■□□□ 1.91
CBWD3-212ENST00000616550 TESPA1A2RU30 521 aaPredicted RBP26.96■■□□□ 1.91
CBWD3-212ENST00000616550 SMARCA5O60264 1052 aaPredicted RBP26.96■■□□□ 1.91
CBWD3-212ENST00000616550 MS4A4AQ96JQ5 239 aa26.96■■□□□ 1.91
CBWD3-212ENST00000616550 DNAJC2Q99543 621 aaKnown RBP26.96■■□□□ 1.91
CBWD3-212ENST00000616550 OSBPL5Q9H0X9 879 aaPredicted RBP26.96■■□□□ 1.91
CBWD3-212ENST00000616550 IGF2BP3O00425 579 aaKnown RBP eCLIP26.95■■□□□ 1.9
CBWD3-212ENST00000616550 MAP3K10Q02779 954 aa26.95■■□□□ 1.9
CBWD3-212ENST00000616550 CFHR5Q9BXR6 569 aa26.95■■□□□ 1.9
CBWD3-212ENST00000616550 ATRNL1Q5VV63 1379 aa26.95■■□□□ 1.9
CBWD3-212ENST00000616550 PPATQ06203 517 aa26.94■■□□□ 1.9
CBWD3-212ENST00000616550 PPIL2Q13356 520 aa26.94■■□□□ 1.9
CBWD3-212ENST00000616550 NOL9Q5SY16 702 aaKnown RBP26.94■■□□□ 1.9
CBWD3-212ENST00000616550 CERS3Q8IU89 383 aa26.94■■□□□ 1.9
CBWD3-212ENST00000616550 TGFBRAP1Q8WUH2 860 aa26.94■■□□□ 1.9
CBWD3-212ENST00000616550 BOLA2Q9H3K6 86 aa26.94■■□□□ 1.9
CBWD3-212ENST00000616550 CCL15-CCL14A0A0B4J2E2 113 aa26.93■■□□□ 1.9
CBWD3-212ENST00000616550 PHF20L1A8MW92 1017 aa26.93■■□□□ 1.9
CBWD3-212ENST00000616550 GOLIM4O00461 696 aa26.93■■□□□ 1.9
CBWD3-212ENST00000616550 ATP5JP18859 108 aa26.93■■□□□ 1.9
CBWD3-212ENST00000616550 CCL15Q16663 113 aa26.93■■□□□ 1.9
CBWD3-212ENST00000616550 PTPN18Q99952 460 aa26.93■■□□□ 1.9
CBWD3-212ENST00000616550 GPR25O00155 361 aa26.92■■□□□ 1.9
CBWD3-212ENST00000616550 IRF6O14896 467 aa26.92■■□□□ 1.9
CBWD3-212ENST00000616550 TBC1D12O60347 775 aa26.92■■□□□ 1.9
CBWD3-212ENST00000616550 CETPP11597 493 aa26.92■■□□□ 1.9
CBWD3-212ENST00000616550 DYNLL1P63167 89 aaKnown RBP26.92■■□□□ 1.9
CBWD3-212ENST00000616550 SNAPC2Q13487 334 aa26.92■■□□□ 1.9
CBWD3-212ENST00000616550 MIGA1Q8NAN2 632 aa26.92■■□□□ 1.9
CBWD3-212ENST00000616550 DHX36Q9H2U1 1008 aaKnown RBP26.92■■□□□ 1.9
CBWD3-212ENST00000616550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.92■■□□□ 1.9
CBWD3-212ENST00000616550 COL2A1P02458 1487 aaPredicted RBP26.92■■□□□ 1.9
CBWD3-212ENST00000616550 NOM1Q5C9Z4 860 aaKnown RBP26.91■■□□□ 1.9
CBWD3-212ENST00000616550 BRI3BPQ8WY22 251 aa26.91■■□□□ 1.9
CBWD3-212ENST00000616550 PICK1Q9NRD5 415 aa26.91■■□□□ 1.9
CBWD3-212ENST00000616550 CDK5RAP2Q96SN8 1893 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 DGKZQ13574 1117 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 SLC9C2Q5TAH2 1124 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 MAPKAPK5Q8IW41 473 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 SCYL3Q8IZE3 742 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 ZNF296Q8WUU4 475 aaPredicted RBP26.9■■□□□ 1.9
CBWD3-212ENST00000616550 HAUS7Q99871 368 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 R3HDMLQ9H3Y0 253 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 PAG1Q9NWQ8 432 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 PI4KBQ9UBF8 816 aa26.9■■□□□ 1.9
CBWD3-212ENST00000616550 CTNND1O60716 968 aaKnown RBP26.89■■□□□ 1.9
CBWD3-212ENST00000616550 CAPN15O75808 1086 aa26.89■■□□□ 1.9
CBWD3-212ENST00000616550 SLURP2P0DP57 97 aa26.89■■□□□ 1.9
CBWD3-212ENST00000616550 FLT1P17948 1338 aa26.89■■□□□ 1.89
CBWD3-212ENST00000616550 FOCADQ5VW36 1801 aa26.88■■□□□ 1.89
CBWD3-212ENST00000616550 PDE6AP16499 860 aa26.88■■□□□ 1.89
CBWD3-212ENST00000616550 USP5P45974 858 aa26.88■■□□□ 1.89
CBWD3-212ENST00000616550 EDC3Q96F86 508 aaKnown RBP26.88■■□□□ 1.89
CBWD3-212ENST00000616550 GPATCH3Q96I76 525 aa26.88■■□□□ 1.89
CBWD3-212ENST00000616550 MAGEB6P1A0A0J9YX57 407 aa26.87■■□□□ 1.89
CBWD3-212ENST00000616550 FKTNO75072 461 aa26.87■■□□□ 1.89
CBWD3-212ENST00000616550 ABHD8Q96I13 439 aa26.87■■□□□ 1.89
CBWD3-212ENST00000616550 MCOLN1Q9GZU1 580 aa26.87■■□□□ 1.89
CBWD3-212ENST00000616550 ECHDC1Q9NTX5 307 aa26.87■■□□□ 1.89
CBWD3-212ENST00000616550 HERC5Q9UII4 1024 aaKnown RBP26.87■■□□□ 1.89
CBWD3-212ENST00000616550 FAM196BA6NMK8 535 aa26.86■■□□□ 1.89
CBWD3-212ENST00000616550 CRHR2Q13324 411 aa26.86■■□□□ 1.89
CBWD3-212ENST00000616550 AAMPQ13685 434 aa26.86■■□□□ 1.89
CBWD3-212ENST00000616550 CTU1Q7Z7A3 348 aaKnown RBP26.86■■□□□ 1.89
CBWD3-212ENST00000616550 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms