RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-217ENST00000616545 TDRD3Q9H7E2 651 aaKnown RBP13.86□□□□□ -0.19
TARDBP-217ENST00000616545 ZNF287Q9HBT7 754 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 EPB41L4AQ9HCS5 686 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-217ENST00000616545 MCM9Q9NXL9 1143 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 ZNF70Q9UC06 446 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-217ENST00000616545 HACL1Q9UJ83 578 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 FLT1P17948 1338 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 COL2A1P02458 1487 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-217ENST00000616545 SLC27A2O14975 620 aa13.85□□□□□ -0.19
TARDBP-217ENST00000616545 HMGB1P09429 215 aaKnown RBP13.85□□□□□ -0.19
TARDBP-217ENST00000616545 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
TARDBP-217ENST00000616545 TM6SF1Q9BZW5 370 aa13.85□□□□□ -0.19
TARDBP-217ENST00000616545 PITPNM2Q9BZ72 1349 aa13.85□□□□□ -0.19
TARDBP-217ENST00000616545 USP17L12C9JPN9 530 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 USP17L21D6R901 530 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 POLR3DP05423 398 aaPredicted RBP13.84□□□□□ -0.19
TARDBP-217ENST00000616545 CYP21A2P08686 494 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 PPARAQ07869 468 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 C12orf60Q5U649 245 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 CTR9Q6PD62 1173 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 PNMA8AQ86V59 439 aaPredicted RBP13.84□□□□□ -0.19
TARDBP-217ENST00000616545 APOBEC3FQ8IUX4 373 aaKnown RBP13.84□□□□□ -0.19
TARDBP-217ENST00000616545 MAPKAPK5Q8IW41 473 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
TARDBP-217ENST00000616545 FAM151AQ8WW52 585 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
TARDBP-217ENST00000616545 CNNM2Q9H8M5 875 aa13.84□□□□□ -0.19
TARDBP-217ENST00000616545 HLA-DOAP06340 250 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 EPS15P42566 896 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 TRDNQ13061 729 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 TBC1D10BQ4KMP7 808 aaPredicted RBP13.83□□□□□ -0.2
TARDBP-217ENST00000616545 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 STAG1Q8WVM7 1258 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 HOOK2Q96ED9 719 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 EHD4Q9H223 541 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 PPP2R3BQ9Y5P8 575 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 SNX14Q9Y5W7 946 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 ROBO3Q96MS0 1386 aa13.83□□□□□ -0.2
TARDBP-217ENST00000616545 FGRP09769 529 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 EPHX2P34913 555 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 PDE4BQ07343 736 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 RABEP1Q15276 862 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 NBPF9Q3BBW0 867 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 AKNAD1Q5T1N1 836 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 RBM26Q5T8P6 1007 aaKnown RBP13.82□□□□□ -0.2
TARDBP-217ENST00000616545 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
TARDBP-217ENST00000616545 KRT23Q9C075 422 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 FAM198AQ9UFP1 575 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 SWAP70Q9UH65 585 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 PCDHAC2Q9Y5I4 1007 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 SCN4AP35499 1836 aa13.82□□□□□ -0.2
TARDBP-217ENST00000616545 WDR90Q96KV7 1748 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 FOCADQ5VW36 1801 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 SHTN1A0MZ66 631 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 MINDY4BA8MYZ0 360 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 ORC4O43929 436 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 NFIAQ12857 509 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 PICALMQ13492 652 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 MFSD6Q6ZSS7 791 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 NCOA7Q8NI08 942 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 MTA3Q9BTC8 594 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 VEZTQ9HBM0 779 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 DDX4Q9NQI0 724 aaKnown RBP13.81□□□□□ -0.2
TARDBP-217ENST00000616545 PGAP2Q9UHJ9 254 aa13.81□□□□□ -0.2
TARDBP-217ENST00000616545 ECM29Q5VYK3 1845 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 CLRN2A0PK11 232 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 E7EWF7 191 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 VEGFAP15692 232 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-217ENST00000616545 RALYLQ86SE5 291 aaKnown RBP13.8□□□□□ -0.2
TARDBP-217ENST00000616545 METTL16Q86W50 562 aaKnown RBP13.8□□□□□ -0.2
TARDBP-217ENST00000616545 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 NEK1Q96PY6 1258 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 TAF1DQ9H5J8 278 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-217ENST00000616545 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 HERC5Q9UII4 1024 aaKnown RBP13.8□□□□□ -0.2
TARDBP-217ENST00000616545 SERPINB13Q9UIV8 391 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 PALD1Q9ULE6 856 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 WDR19Q8NEZ3 1342 aa13.8□□□□□ -0.2
TARDBP-217ENST00000616545 ADAMTSL1Q8N6G6 1762 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 TCP10L2B9ZVM9 353 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 TBC1D12O60347 775 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 EGFRP00533 1210 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 HAND2P61296 217 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 TCP10Q12799 353 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 BLOC1S2Q6QNY1 142 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 C16orf86Q6ZW13 317 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 ZSCAN29Q8IWY8 852 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-217ENST00000616545 ESR2Q92731 530 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 DCPSQ96C86 337 aaKnown RBP13.79□□□□□ -0.2
TARDBP-217ENST00000616545 KIF2CQ99661 725 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 CYP46A1Q9Y6A2 500 aa13.79□□□□□ -0.2
TARDBP-217ENST00000616545 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
TARDBP-217ENST00000616545 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
TARDBP-217ENST00000616545 CDK5RAP2Q96SN8 1893 aa13.78□□□□□ -0.2
TARDBP-217ENST00000616545 ST18O60284 1047 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms