RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CALM1P0DP23 149 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 CALM2P0DP24 149 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 CALM3P0DP25 149 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 ATP1A3P13637 1013 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 FOXO4P98177 505 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 ALDH8A1Q9H2A2 487 aaPredicted RBP6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZHX3Q9H4I2 956 aa6.43□□□□□ -1.38
SYNCRIP-204ENST00000616122 KIF5CO60282 957 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 HIBADHP31937 336 aaKnown RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 RBM6P78332 1123 aaKnown RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 MEX3CQ5U5Q3 659 aaKnown RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 TRMT44Q8IYL2 757 aaKnown RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC12Q8WUD4 166 aaPredicted RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 ST3GAL1Q11201 340 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC70Q6NSX1 233 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZSCAN29Q8IWY8 852 aaPredicted RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 TRIM34Q9BYJ4 488 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 CEP170BQ9Y4F5 1589 aaPredicted RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 NAP1L1P55209 391 aaKnown RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 UBE4AQ14139 1066 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 ARID5BQ14865 1188 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZNF174Q15697 407 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 RRAGBQ5VZM2 374 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 MB21D2Q8IYB1 491 aaPredicted RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 DENND2AQ9ULE3 1009 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 RIPOR2Q9Y4F9 1068 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 ADGRB2O60241 1585 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 CAMSAP1Q5T5Y3 1602 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 ERVV-1B6SEH8 477 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 PSMA7O14818 248 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 GNPATO15228 680 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 FDPSP14324 419 aaKnown RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 KCNQ4P56696 695 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 TFCP2L1Q9NZI6 479 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 RPAP1Q9BWH6 1393 aaPredicted RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 ERLIN1O75477 346 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 KRT18P05783 430 aaKnown RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 RFC4P35249 363 aa6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 NOM1Q5C9Z4 860 aaKnown RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 NUP88Q99567 741 aaPredicted RBP6.42□□□□□ -1.38
SYNCRIP-204ENST00000616122 CNTRLQ7Z7A1 2325 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 AKR1B10O60218 316 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 TOM1O60784 492 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 CHRNDQ07001 517 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 KRBA2Q6ZNG9 492 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC148Q8NFR7 591 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 TRIM47Q96LD4 638 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 RAB34Q9BZG1 259 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 CGNQ9P2M7 1197 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 RTCBQ9Y3I0 505 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 M0R2C6 588 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 NLRP12P59046 1061 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 LRRC8AQ8IWT6 810 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 ERO1AQ96HE7 468 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 SEC63Q9UGP8 760 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 TMEM131LA2VDJ0 1609 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 BAZ2BQ9UIF8 2168 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 TFAP4Q01664 338 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 PPARAQ07869 468 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 BMS1Q14692 1282 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 IQCB1Q15051 598 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 FMR1NBQ8N0W7 255 aaPredicted RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 PYM1Q9BRP8 204 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 DEF6Q9H4E7 631 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 SERTAD1Q9UHV2 236 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 MAPK8IP1Q9UQF2 711 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZNF609O15014 1411 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 A0A0G2JLW4 131 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 TRIM21P19474 475 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 CRKLP46109 303 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 SUSD4Q5VX71 490 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 FEZ1Q99689 392 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 BAG1Q99933 345 aaPredicted RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 LZTFL1Q9NQ48 299 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 RFX7Q2KHR2 1363 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 LDHBP07195 334 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 CSF1RP07333 972 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC175P0C221 793 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 KRT9P35527 623 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 TBC1D10CQ8IV04 446 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 KRT222Q8N1A0 295 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 C8orf37Q96NL8 207 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 SRRTQ9BXP5 876 aaKnown RBP6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 INCENPQ9NQS7 918 aa6.41□□□□□ -1.38
SYNCRIP-204ENST00000616122 MTIF2P46199 727 aaKnown RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 CASP7P55210 303 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC144BQ3MJ40 725 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 LCORLQ8N3X6 602 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC94Q9BW85 323 aaPredicted RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 TANGO6Q9C0B7 1094 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 AATFQ9NY61 560 aaKnown RBP eCLIP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 IMPACTQ9P2X3 320 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 TSPY3P0CV98 308 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 TSPY8P0CW00 308 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 PNOCQ13519 176 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 POSTNQ15063 836 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 ERCC6LQ2NKX8 1250 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 TTC38Q5R3I4 469 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 SGMS1Q86VZ5 419 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms