RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 EPS15P42566 896 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 NDUFA8P51970 172 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 EIF5P55010 431 aaKnown RBP16.04■□□□□ 0.16
SSBP2-220ENST00000615665 NAP1L1P55209 391 aaKnown RBP16.04■□□□□ 0.16
SSBP2-220ENST00000615665 PPARAQ07869 468 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 TRERF1Q96PN7 1200 aa16.04■□□□□ 0.16
SSBP2-220ENST00000615665 TRIM28Q13263 835 aaKnown RBP16.03■□□□□ 0.16
SSBP2-220ENST00000615665 CAGE1Q8TC20 777 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 TAF6LQ9Y6J9 622 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 KDM6AO15550 1401 aaPredicted RBP16.03■□□□□ 0.16
SSBP2-220ENST00000615665 KRT18P05783 430 aaKnown RBP16.03■□□□□ 0.16
SSBP2-220ENST00000615665 CASQ1P31415 396 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 PIH1D3Q9NQM4 214 aaKnown RBP16.03■□□□□ 0.16
SSBP2-220ENST00000615665 PIK3C2AO00443 1686 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 GOLGA6L9A6NEM1 432 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 CALML3P27482 149 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 CHRNDQ07001 517 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 STOX1Q6ZVD7 989 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 ZNF654Q8IZM8 581 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 V9GY48 417 aaPredicted RBP16.03■□□□□ 0.16
SSBP2-220ENST00000615665 AK9Q5TCS8 1911 aa16.03■□□□□ 0.16
SSBP2-220ENST00000615665 CMA1P23946 247 aa16.02■□□□□ 0.16
SSBP2-220ENST00000615665 RBM5P52756 815 aaKnown RBP eCLIP16.02■□□□□ 0.16
SSBP2-220ENST00000615665 PPP2R5BQ15173 497 aa16.02■□□□□ 0.16
SSBP2-220ENST00000615665 KCNB2Q92953 911 aa16.02■□□□□ 0.16
SSBP2-220ENST00000615665 TCP11L1Q9NUJ3 509 aa16.02■□□□□ 0.16
SSBP2-220ENST00000615665 GYG1P46976 350 aa16.02■□□□□ 0.16
SSBP2-220ENST00000615665 CCDC148Q8NFR7 591 aa16.02■□□□□ 0.16
SSBP2-220ENST00000615665 VAT1LQ9HCJ6 419 aa16.02■□□□□ 0.16
SSBP2-220ENST00000615665 SSBP05455 408 aaKnown RBP eCLIP16.02■□□□□ 0.15
SSBP2-220ENST00000615665 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.15
SSBP2-220ENST00000615665 ZNF804AQ7Z570 1209 aa16.02■□□□□ 0.15
SSBP2-220ENST00000615665 ZSCAN29Q8IWY8 852 aaPredicted RBP16.02■□□□□ 0.15
SSBP2-220ENST00000615665 POLR3EQ9NVU0 708 aa16.02■□□□□ 0.15
SSBP2-220ENST00000615665 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.15
SSBP2-220ENST00000615665 KIF5CO60282 957 aa16.02■□□□□ 0.15
SSBP2-220ENST00000615665 FANCCQ00597 558 aa16.02■□□□□ 0.15
SSBP2-220ENST00000615665 LRMPQ12912 555 aa16.02■□□□□ 0.15
SSBP2-220ENST00000615665 MPHOSPH10O00566 681 aaKnown RBP16.01■□□□□ 0.15
SSBP2-220ENST00000615665 POLR2DO15514 142 aaKnown RBP16.01■□□□□ 0.15
SSBP2-220ENST00000615665 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 PGBD1Q96JS3 809 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 NUP88Q99567 741 aaPredicted RBP16.01■□□□□ 0.15
SSBP2-220ENST00000615665 FAM98CQ17RN3 349 aaKnown RBP16.01■□□□□ 0.15
SSBP2-220ENST00000615665 HEATR3Q7Z4Q2 680 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 NOSTRINQ8IVI9 506 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 LINC00301Q8NCQ3 95 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 RMND1Q9NWS8 449 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
SSBP2-220ENST00000615665 SMARCC2Q8TAQ2 1214 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 SDR42E1Q8WUS8 393 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 ACBD3Q9H3P7 528 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
SSBP2-220ENST00000615665 TFCP2L1Q9NZI6 479 aa16.01■□□□□ 0.15
SSBP2-220ENST00000615665 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 MRFAP1L1Q96HT8 127 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 AATFQ9NY61 560 aaKnown RBP eCLIP16■□□□□ 0.15
SSBP2-220ENST00000615665 DNAI1Q9UI46 699 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 PYCARDQ9ULZ3 195 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 N4BP3O15049 544 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 STAT6P42226 847 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 ST5P78524 1137 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 KIF23Q02241 960 aaPredicted RBP16■□□□□ 0.15
SSBP2-220ENST00000615665 ZNF174Q15697 407 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 TMX1Q9H3N1 280 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 IMPACTQ9P2X3 320 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 SH2B2O14492 632 aaPredicted RBP16■□□□□ 0.15
SSBP2-220ENST00000615665 GNG11P61952 73 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 CTAGE1Q96RT6 745 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 TANGO6Q9C0B7 1094 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 SCARF1Q14162 830 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 HSP90B2PQ58FF3 399 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
SSBP2-220ENST00000615665 ZHX3Q9H4I2 956 aa16■□□□□ 0.15
SSBP2-220ENST00000615665 CYP19A1P11511 503 aaPredicted RBP15.99■□□□□ 0.15
SSBP2-220ENST00000615665 MCM7P33993 719 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 SLC39A14Q15043 492 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 CMTR1Q8N1G2 835 aaKnown RBP15.99■□□□□ 0.15
SSBP2-220ENST00000615665 FANCBQ8NB91 859 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 DEF6Q9H4E7 631 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 VWA3AA6NCI4 1184 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 IGSF3O75054 1194 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 STX17P56962 302 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 SUSD4Q5VX71 490 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 TMCO3Q6UWJ1 677 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 RAB34Q9BZG1 259 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
SSBP2-220ENST00000615665 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 TMEM266Q2M3C6 531 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 CCDC24Q8N4L8 307 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 XPO4Q9C0E2 1151 aaKnown RBP15.99■□□□□ 0.15
SSBP2-220ENST00000615665 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
SSBP2-220ENST00000615665 TNKSO95271 1327 aa15.99■□□□□ 0.15
SSBP2-220ENST00000615665 BTBD18B2RXH4 712 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 PNOCQ13519 176 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 CCDC96Q2M329 555 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 IQUBQ8NA54 791 aa15.98■□□□□ 0.15
SSBP2-220ENST00000615665 UBAP1LF5GYI3 381 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms