RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 HMGCRP04035 888 aa12.08□□□□□ -0.48
SNX9-202ENST00000614703 PUM3Q15397 648 aaKnown RBP12.08□□□□□ -0.48
SNX9-202ENST00000614703 HMX1Q9NP08 348 aaPredicted RBP12.08□□□□□ -0.48
SNX9-202ENST00000614703 MTMR10Q9NXD2 777 aa12.08□□□□□ -0.48
SNX9-202ENST00000614703 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
SNX9-202ENST00000614703 RPTORQ8N122 1335 aa12.08□□□□□ -0.48
SNX9-202ENST00000614703 FANCIQ9NVI1 1328 aa12.08□□□□□ -0.48
SNX9-202ENST00000614703 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
SNX9-202ENST00000614703 PABPC4Q13310 644 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNX9-202ENST00000614703 FAM110CQ1W6H9 321 aa12.07□□□□□ -0.48
SNX9-202ENST00000614703 CDC42EP5Q6NZY7 148 aa12.07□□□□□ -0.48
SNX9-202ENST00000614703 SLC4A10Q6U841 1118 aa12.07□□□□□ -0.48
SNX9-202ENST00000614703 UBE2OQ9C0C9 1292 aaKnown RBP12.07□□□□□ -0.48
SNX9-202ENST00000614703 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
SNX9-202ENST00000614703 ZMYND8Q9ULU4 1186 aaPredicted RBP12.07□□□□□ -0.48
SNX9-202ENST00000614703 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
SNX9-202ENST00000614703 AFG3L2Q9Y4W6 797 aa12.07□□□□□ -0.48
SNX9-202ENST00000614703 PTPRFP10586 1907 aa12.07□□□□□ -0.48
SNX9-202ENST00000614703 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
SNX9-202ENST00000614703 ENTPD3O75355 529 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
SNX9-202ENST00000614703 SLC5A1P13866 664 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 PTPRAP18433 802 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 GCLCP48506 637 aaPredicted RBP12.06□□□□□ -0.48
SNX9-202ENST00000614703 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 VGLL2Q8N8G2 317 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 SUCLG2Q96I99 432 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 C11orf49Q9H6J7 331 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 USP40Q9NVE5 1235 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 AGTPBP1Q9UPW5 1226 aa12.06□□□□□ -0.48
SNX9-202ENST00000614703 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 MAGEA10P43363 369 aaPredicted RBP12.05□□□□□ -0.48
SNX9-202ENST00000614703 NFIAQ12857 509 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 RABL6Q3YEC7 729 aaPredicted RBP12.05□□□□□ -0.48
SNX9-202ENST00000614703 LRRC24Q50LG9 513 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 Q7L0L9 218 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNX9-202ENST00000614703 ZSCAN29Q8IWY8 852 aaPredicted RBP12.05□□□□□ -0.48
SNX9-202ENST00000614703 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
SNX9-202ENST00000614703 ANKRD13CQ8N6S4 541 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
SNX9-202ENST00000614703 LPIN2Q92539 896 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 COL25A1Q9BXS0 654 aaPredicted RBP12.05□□□□□ -0.48
SNX9-202ENST00000614703 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
SNX9-202ENST00000614703 FAM198AQ9UFP1 575 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 DOCK1Q14185 1865 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 UTYO14607 1347 aa12.05□□□□□ -0.48
SNX9-202ENST00000614703 MAP3K10Q02779 954 aa12.04□□□□□ -0.48
SNX9-202ENST00000614703 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
SNX9-202ENST00000614703 FAM109BQ6ICB4 259 aaPredicted RBP12.04□□□□□ -0.48
SNX9-202ENST00000614703 DIS3LQ8TF46 1054 aaKnown RBP12.04□□□□□ -0.48
SNX9-202ENST00000614703 IDI2Q9BXS1 227 aa12.04□□□□□ -0.48
SNX9-202ENST00000614703 DDX60LQ5H9U9 1706 aaKnown RBP12.03□□□□□ -0.48
SNX9-202ENST00000614703 TRIM75PA6NK02 468 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 SEMA3EO15041 775 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 NBPF7P0C2Y1 421 aaPredicted RBP12.03□□□□□ -0.48
SNX9-202ENST00000614703 FGFR2P21802 821 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 RGS3P49796 1198 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 TRMT44Q8IYL2 757 aaKnown RBP12.03□□□□□ -0.48
SNX9-202ENST00000614703 KAZALD1Q96I82 304 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 SPINK5Q9NQ38 1064 aaPredicted RBP12.03□□□□□ -0.48
SNX9-202ENST00000614703 OGDHLQ9ULD0 1010 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 SALL1Q9NSC2 1324 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 MYH2Q9UKX2 1941 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 ATRNL1Q5VV63 1379 aa12.03□□□□□ -0.48
SNX9-202ENST00000614703 LAMA2P24043 3122 aaKnown RBP12.02□□□□□ -0.48
SNX9-202ENST00000614703 PHIPQ8WWQ0 1821 aa12.02□□□□□ -0.48
SNX9-202ENST00000614703 SYN1P17600 705 aa12.02□□□□□ -0.49
SNX9-202ENST00000614703 PRDX5P30044 214 aa12.01□□□□□ -0.49
SNX9-202ENST00000614703 SOCS4Q8WXH5 440 aa12.01□□□□□ -0.49
SNX9-202ENST00000614703 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
SNX9-202ENST00000614703 VCANP13611 3396 aa12.01□□□□□ -0.49
SNX9-202ENST00000614703 EYA2O00167 538 aa12□□□□□ -0.49
SNX9-202ENST00000614703 ZBTB22O15209 634 aa12□□□□□ -0.49
SNX9-202ENST00000614703 TBC1D12O60347 775 aa12□□□□□ -0.49
SNX9-202ENST00000614703 XRCC5P13010 732 aaKnown RBP12□□□□□ -0.49
SNX9-202ENST00000614703 SPTY2D1Q68D10 685 aaPredicted RBP12□□□□□ -0.49
SNX9-202ENST00000614703 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
SNX9-202ENST00000614703 ZFPM1Q8IX07 1006 aa12□□□□□ -0.49
SNX9-202ENST00000614703 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
SNX9-202ENST00000614703 ZNF280CQ8ND82 737 aa12□□□□□ -0.49
SNX9-202ENST00000614703 LBHD1Q9BQE6 289 aaPredicted RBP12□□□□□ -0.49
SNX9-202ENST00000614703 OSBPL5Q9H0X9 879 aaPredicted RBP12□□□□□ -0.49
SNX9-202ENST00000614703 GJD2Q9UKL4 321 aa12□□□□□ -0.49
SNX9-202ENST00000614703 LOC285556D6RIA3 1793 aa12□□□□□ -0.49
SNX9-202ENST00000614703 DNAH12Q6ZR08 3092 aa11.99□□□□□ -0.49
SNX9-202ENST00000614703 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
SNX9-202ENST00000614703 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
SNX9-202ENST00000614703 PDE3AQ14432 1141 aa11.99□□□□□ -0.49
SNX9-202ENST00000614703 TREML2Q5T2D2 321 aa11.99□□□□□ -0.49
SNX9-202ENST00000614703 ZNF697Q5TEC3 545 aa11.99□□□□□ -0.49
SNX9-202ENST00000614703 CCAR1Q8IX12 1150 aaKnown RBP11.99□□□□□ -0.49
SNX9-202ENST00000614703 NUDT12Q9BQG2 462 aa11.99□□□□□ -0.49
SNX9-202ENST00000614703 AS3MTQ9HBK9 375 aa11.99□□□□□ -0.49
SNX9-202ENST00000614703 GAKO14976 1311 aa11.99□□□□□ -0.49
SNX9-202ENST00000614703 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms