RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 VPS16Q9H269 839 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 GREM2Q9H772 168 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 CNNM2Q9H8M5 875 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 PSDA5PKW4 1024 aaPredicted RBP14.3□□□□□ -0.12
MSH6-213ENST00000614496 AKR1B15C9JRZ8 316 aaPredicted RBP14.3□□□□□ -0.12
MSH6-213ENST00000614496 FDPSP14324 419 aaKnown RBP14.3□□□□□ -0.12
MSH6-213ENST00000614496 PDE6AP16499 860 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 SNAP23O00161 211 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 PLIN2Q99541 437 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 ZMYM6O95789 1325 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 NBPF26B4DH59 902 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 TUBB4AP04350 444 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 NBPF14Q5TI25 921 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 NBPF10Q6P3W6 841 aaKnown RBP14.3□□□□□ -0.12
MSH6-213ENST00000614496 KLHL34Q8N239 644 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 NBPF15Q8N660 670 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 IL17RAQ96F46 866 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 PCDH11XQ9BZA7 1347 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 PCDH11YQ9BZA8 1340 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 CLCN6P51797 869 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 FOXO4P98177 505 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 STIM1Q13586 685 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 AMOTL1Q8IY63 956 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 DPF2Q92785 391 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 VPS54Q9P1Q0 977 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 WDHD1O75717 1129 aaPredicted RBP14.29□□□□□ -0.12
MSH6-213ENST00000614496 RILPL1Q5EBL4 403 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 IFIT1BQ5T764 474 aaKnown RBP14.29□□□□□ -0.12
MSH6-213ENST00000614496 E4F1Q66K89 784 aaPredicted RBP14.29□□□□□ -0.12
MSH6-213ENST00000614496 SPECC1LQ69YQ0 1117 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 CADPS2Q86UW7 1296 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 DIP2AQ14689 1571 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 NOSTRINQ8IVI9 506 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 NOC3LQ8WTT2 800 aaKnown RBP14.29□□□□□ -0.12
MSH6-213ENST00000614496 ESR2Q92731 530 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 GPR108Q9NPR9 543 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 WWC3Q9ULE0 1092 aa14.29□□□□□ -0.12
MSH6-213ENST00000614496 V9GY48 417 aaPredicted RBP14.29□□□□□ -0.12
MSH6-213ENST00000614496 RICTORQ6R327 1708 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 NR5A1Q13285 461 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 SYCP1Q15431 976 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 DZIP3Q86Y13 1208 aaKnown RBP14.28□□□□□ -0.12
MSH6-213ENST00000614496 TEX13AQ9BXU3 409 aaPredicted RBP14.28□□□□□ -0.12
MSH6-213ENST00000614496 GUCA1BQ9UMX6 200 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 DIP2BQ9P265 1576 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 DNA2P51530 1060 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 RABL6Q3YEC7 729 aaPredicted RBP14.28□□□□□ -0.12
MSH6-213ENST00000614496 ENGASEQ8NFI3 743 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 NEK11Q8NG66 645 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 RUFY1Q96T51 708 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 DEF6Q9H4E7 631 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 FOXN1O15353 648 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 MCM7P33993 719 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 VPS18Q9P253 973 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 DENND2AQ9ULE3 1009 aa14.28□□□□□ -0.12
MSH6-213ENST00000614496 NPHP4O75161 1426 aaPredicted RBP14.27□□□□□ -0.12
MSH6-213ENST00000614496 OAS2P29728 719 aaKnown RBP14.27□□□□□ -0.12
MSH6-213ENST00000614496 MLKLQ8NB16 471 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 JAG2Q9Y219 1238 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 UTYO14607 1347 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 AGLP35573 1532 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 RBM43Q6ZSC3 357 aaKnown RBP14.27□□□□□ -0.12
MSH6-213ENST00000614496 CYB5R4Q7L1T6 521 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 SMYD4Q8IYR2 804 aaPredicted RBP14.27□□□□□ -0.12
MSH6-213ENST00000614496 CCDC148Q8NFR7 591 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 BLZF1Q9H2G9 400 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 CTNND2Q9UQB3 1225 aa14.27□□□□□ -0.12
MSH6-213ENST00000614496 CTAGE9A4FU28 777 aa14.27□□□□□ -0.13
MSH6-213ENST00000614496 TBC1D10CQ8IV04 446 aa14.27□□□□□ -0.13
MSH6-213ENST00000614496 IFNL3Q8IZI9 196 aa14.27□□□□□ -0.13
MSH6-213ENST00000614496 SAMSN1Q9NSI8 373 aaKnown RBP14.27□□□□□ -0.13
MSH6-213ENST00000614496 PRKAB2O43741 272 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 TMTC2Q8N394 836 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSH6-213ENST00000614496 OSBPL5Q9H0X9 879 aaPredicted RBP14.26□□□□□ -0.13
MSH6-213ENST00000614496 CTAGE15A4D2H0 777 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 DEXIO95424 95 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 CTAGE8P0CG41 777 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 MCAMP43121 646 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 AKNAD1Q5T1N1 836 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 CTAGE6Q86UF2 777 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 GPIHBP1Q8IV16 184 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 CTAGE4Q8IX94 777 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 CAPZA3Q96KX2 299 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 TANGO6Q9C0B7 1094 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 ASAP1Q9ULH1 1129 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 NCAPD2Q15021 1401 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 TSPY2A6NKD2 308 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 IKBKBO14920 756 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 CDC27P30260 824 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 TERF2Q15554 542 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 SPATA5Q8NB90 893 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 PIH1D3Q9NQM4 214 aaKnown RBP14.26□□□□□ -0.13
MSH6-213ENST00000614496 PXDNQ92626 1479 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 KRT2P35908 639 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSH6-213ENST00000614496 CAVIN4Q5BKX8 364 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 MB21D2Q8IYB1 491 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms