RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 SLC4A4Q9Y6R1 1079 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 GLTPD2A6NH11 291 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 SLC27A2O14975 620 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 WDHD1O75717 1129 aaPredicted RBP7.44□□□□□ -1.22
CBWD3-210ENST00000614398 SCNN1DP51172 638 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 DYNLL1P63167 89 aaKnown RBP7.44□□□□□ -1.22
CBWD3-210ENST00000614398 DLGAP5Q15398 846 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 CREB3L3Q68CJ9 461 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 KIAA0825Q8IV33 1275 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 FBXL16Q8N461 479 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 SH3RF3Q8TEJ3 882 aaPredicted RBP7.44□□□□□ -1.22
CBWD3-210ENST00000614398 MYOZ2Q9NPC6 264 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 AATFQ9NY61 560 aaKnown RBP eCLIP7.44□□□□□ -1.22
CBWD3-210ENST00000614398 PPP2R3BQ9Y5P8 575 aa7.44□□□□□ -1.22
CBWD3-210ENST00000614398 FLT1P17948 1338 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 RRP9O43818 475 aaKnown RBP7.43□□□□□ -1.22
CBWD3-210ENST00000614398 FGAP02671 866 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 NBR1Q14596 966 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 VPS53Q5VIR6 699 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 TEX11Q8IYF3 940 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 MIGA1Q8NAN2 632 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 DDRGK1Q96HY6 314 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 DHX36Q9H2U1 1008 aaKnown RBP7.43□□□□□ -1.22
CBWD3-210ENST00000614398 PGAP2Q9UHJ9 254 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 IMMTQ16891 758 aaKnown RBP7.43□□□□□ -1.22
CBWD3-210ENST00000614398 DPY19L2Q6NUT2 758 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 MICALL2Q8IY33 904 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 STAG1Q8WVM7 1258 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 KIF2CQ99661 725 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 OSBPL5Q9H0X9 879 aaPredicted RBP7.43□□□□□ -1.22
CBWD3-210ENST00000614398 NAPBQ9H115 298 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 ADARB2Q9NS39 739 aaKnown RBP7.43□□□□□ -1.22
CBWD3-210ENST00000614398 USP40Q9NVE5 1235 aa7.43□□□□□ -1.22
CBWD3-210ENST00000614398 ZNF70Q9UC06 446 aaPredicted RBP7.43□□□□□ -1.22
CBWD3-210ENST00000614398 CNOT7Q9UIV1 285 aaKnown RBP7.43□□□□□ -1.22
CBWD3-210ENST00000614398 MYH8P13535 1937 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 PLIN4Q96Q06 1357 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 H7C1D1 291 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 ORC4O43929 436 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 HMGB1P09429 215 aaKnown RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 ZKSCAN1P17029 563 aaPredicted RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 RBM10P98175 930 aaKnown RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 MAP3K10Q02779 954 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 RABEP1Q15276 862 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 C12orf60Q5U649 245 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 USP50Q70EL3 339 aaPredicted RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 ZC3H15Q8WU90 426 aaKnown RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 RNF41Q9H4P4 317 aaPredicted RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 TMOD2Q9NZR1 351 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 ZBTB12Q9Y330 459 aaPredicted RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 SNX14Q9Y5W7 946 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 CNTNAP1P78357 1384 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 IQCA1LA6NCM1 817 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 PRKAB2O43741 272 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 MYO1BO43795 1136 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 CYP21A2P08686 494 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 PSMA5P28066 241 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 TNFAIP1Q13829 316 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 KIF4BQ2VIQ3 1234 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 CTR9Q6PD62 1173 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 APOBEC3FQ8IUX4 373 aaKnown RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 FAM151AQ8WW52 585 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 PRMT6Q96LA8 375 aaPredicted RBP7.42□□□□□ -1.22
CBWD3-210ENST00000614398 NBPF3Q9H094 633 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 FAM198AQ9UFP1 575 aa7.42□□□□□ -1.22
CBWD3-210ENST00000614398 F8W031 263 aaPredicted RBP7.41□□□□□ -1.22
CBWD3-210ENST00000614398 WNT10BO00744 389 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 TBC1D12O60347 775 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 SLC3A2P08195 630 aaKnown RBP7.41□□□□□ -1.22
CBWD3-210ENST00000614398 LMOD1P29536 600 aaPredicted RBP7.41□□□□□ -1.22
CBWD3-210ENST00000614398 GABPAQ06546 454 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 PPARAQ07869 468 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 TTC6Q86TZ1 520 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 AMOTL1Q8IY63 956 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 ZSWIM6Q9HCJ5 1215 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 SWAP70Q9UH65 585 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 ZNF213O14771 459 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 USP5P45974 858 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 TDO2P48775 406 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 TNNI2P48788 182 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 C16orf86Q6ZW13 317 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 SNX21Q969T3 373 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 IPO9Q96P70 1041 aaKnown RBP7.41□□□□□ -1.22
CBWD3-210ENST00000614398 RNF39Q9H2S5 420 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 DDX4Q9NQI0 724 aaKnown RBP7.41□□□□□ -1.22
CBWD3-210ENST00000614398 GINM1Q9NU53 330 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 HACL1Q9UJ83 578 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 GJA3Q9Y6H8 435 aa7.41□□□□□ -1.22
CBWD3-210ENST00000614398 AKNAD1Q5T1N1 836 aa7.4□□□□□ -1.22
CBWD3-210ENST00000614398 MB21D2Q8IYB1 491 aaPredicted RBP7.4□□□□□ -1.22
CBWD3-210ENST00000614398 RASEFQ8IZ41 740 aa7.4□□□□□ -1.22
CBWD3-210ENST00000614398 TGFBRAP1Q8WUH2 860 aa7.4□□□□□ -1.22
CBWD3-210ENST00000614398 SDR42E1Q8WUS8 393 aa7.4□□□□□ -1.22
CBWD3-210ENST00000614398 HOOK2Q96ED9 719 aa7.4□□□□□ -1.22
CBWD3-210ENST00000614398 AGXT2Q9BYV1 514 aa7.4□□□□□ -1.22
CBWD3-210ENST00000614398 KRT23Q9C075 422 aa7.4□□□□□ -1.22
CBWD3-210ENST00000614398 ZNF287Q9HBT7 754 aa7.4□□□□□ -1.22
CBWD3-210ENST00000614398 PALD1Q9ULE6 856 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms