RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 ZNF131P52739 623 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 ZBED6P86452 979 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 AMPD3Q01432 767 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 SFSWAPQ12872 951 aaKnown RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 POSTNQ15063 836 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 PDXDC1Q6P996 788 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 SKAP1Q86WV1 359 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 LSRQ86X29 649 aaPredicted RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 RELL1Q8IUW5 271 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 ARL6IP6Q8N6S5 226 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 SH3TC2Q8TF17 1288 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 MRFAP1L1Q96HT8 127 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 RBM17Q96I25 401 aaKnown RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CDK5RAP3Q96JB5 506 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 BAG1Q99933 345 aaPredicted RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CRACR2AQ9BSW2 395 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CARD14Q9BXL6 1004 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 LGR6Q9HBX8 967 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CLIC5Q9NZA1 410 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CLIP2Q9UDT6 1046 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 PGAP2Q9UHJ9 254 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 MAFFQ9ULX9 164 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 RABGAP1Q9Y3P9 1069 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 IKBKGQ9Y6K9 419 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CC2D2AQ9P2K1 1620 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 TMEM94Q12767 1356 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 PIK3R4Q99570 1358 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 NPC1L1Q9UHC9 1359 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CFAP99D6REC4 459 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CTIFO43310 598 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 RTN2O75298 545 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 MYL1P05976 194 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PIK3CAP42336 1068 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PDE4BQ07343 736 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 EIF2B5Q13144 721 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PRPF4BQ13523 1007 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 MRPL58Q14197 206 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 ELOAQ14241 798 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 KRT72Q14CN4 511 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CCDC158Q5M9N0 1113 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 DESI1Q6ICB0 168 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 LYPD8Q6UX82 237 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SH3RF1Q7Z6J0 888 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 BRSK2Q8IWQ3 736 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 THEMISQ8N1K5 641 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PDCL2Q8N4E4 241 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 GABPB2Q8TAK5 448 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 RPAP3Q9H6T3 665 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CCSER2Q9H7U1 834 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 UPF2Q9HAU5 1272 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CAPN10Q9HC96 672 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 ZMAT5Q9UDW3 170 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 MKRN1Q9UHC7 482 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CTNNA3Q9UI47 895 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 EID1Q9Y6B2 187 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 FAM170AA1A519 330 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 ORC4O43929 436 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SNUPNO95149 360 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CYP11B2P19099 503 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SSTR3P32745 418 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 USP11P51784 963 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 TRIM29Q14134 588 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SIM2Q14190 667 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SEPT2Q15019 361 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PARP10Q53GL7 1025 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PLEKHG4Q58EX7 1191 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SPDYCQ5MJ68 293 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 ANKRD45Q5TZF3 282 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SAPCD2Q86UD0 394 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CCDC116Q8IYX3 515 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SLC35B4Q969S0 331 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CENPTQ96BT3 561 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 ZBTB10Q96DT7 871 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PDLIM2Q96JY6 352 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 FAM81BQ96LP2 452 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SLKQ9H2G2 1235 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 DHX36Q9H2U1 1008 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 AS3MTQ9HBK9 375 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 ARNT2Q9HBZ2 717 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 CPSF2Q9P2I0 782 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 EMILIN1Q9Y6C2 1016 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 ERCC6L2Q5T890 1561 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SLC35F4A4IF30 521 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PALM3A6NDB9 673 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 E2F6O75461 281 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 SASH1O94885 1247 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 MYL3P08590 195 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 MYCLP1P12525 358 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 PECAM1P16284 738 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 BTF3P20290 206 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 MSNP26038 577 aaKnown RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 LMOD1P29536 600 aaPredicted RBP3.51□□□□□ -1.85
CBWD3-209ENST00000614377 TSPAN7P41732 249 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 COBLL1Q53SF7 1204 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 AKNAD1Q5T1N1 836 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 DAAM2Q86T65 1068 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 LRRC49Q8IUZ0 686 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 IFNL3Q8IZI9 196 aa3.51□□□□□ -1.85
CBWD3-209ENST00000614377 IQUBQ8NA54 791 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms