RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NAPBQ9H115 298 aa17.56■□□□□ 0.4
CD48-203ENST00000613788 NMRK2Q9NPI5 230 aa17.56■□□□□ 0.4
CD48-203ENST00000613788 GGA3Q9NZ52 723 aa17.56■□□□□ 0.4
CD48-203ENST00000613788 FLT1P17948 1338 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 PITPNM2Q9BZ72 1349 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 FGAP02671 866 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 AMOTL1Q8IY63 956 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 FAM151AQ8WW52 585 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 BACH2Q9BYV9 841 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 GPBP1L1Q9HC44 474 aaPredicted RBP17.55■□□□□ 0.4
CD48-203ENST00000613788 DDX4Q9NQI0 724 aaKnown RBP17.55■□□□□ 0.4
CD48-203ENST00000613788 MCM9Q9NXL9 1143 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 FAM198AQ9UFP1 575 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 MKRN1Q9UHC7 482 aaKnown RBP17.55■□□□□ 0.4
CD48-203ENST00000613788 PGAP2Q9UHJ9 254 aa17.55■□□□□ 0.4
CD48-203ENST00000613788 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
CD48-203ENST00000613788 FOXP2O15409 715 aa17.54■□□□□ 0.4
CD48-203ENST00000613788 TCP10Q12799 353 aa17.54■□□□□ 0.4
CD48-203ENST00000613788 OSBPL5Q9H0X9 879 aaPredicted RBP17.54■□□□□ 0.4
CD48-203ENST00000613788 EPB41L4AQ9HCS5 686 aaPredicted RBP17.54■□□□□ 0.4
CD48-203ENST00000613788 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
CD48-203ENST00000613788 ASTN2O75129 1339 aaPredicted RBP17.54■□□□□ 0.4
CD48-203ENST00000613788 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
CD48-203ENST00000613788 POLR3DP05423 398 aaPredicted RBP17.53■□□□□ 0.4
CD48-203ENST00000613788 YY1P25490 414 aa17.53■□□□□ 0.4
CD48-203ENST00000613788 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
CD48-203ENST00000613788 ARPP21Q9UBL0 812 aaPredicted RBP17.53■□□□□ 0.4
CD48-203ENST00000613788 USP17L12C9JPN9 530 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 USP17L21D6R901 530 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 SEC24BO95487 1268 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 RASA3Q14644 834 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 SBK1Q52WX2 424 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 TTC6Q86TZ1 520 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 SULF1Q8IWU6 871 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 ZSCAN29Q8IWY8 852 aaPredicted RBP17.52■□□□□ 0.4
CD48-203ENST00000613788 USP26Q9BXU7 913 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 DEFB129Q9H1M3 183 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.4
CD48-203ENST00000613788 PPP2R3BQ9Y5P8 575 aa17.52■□□□□ 0.4
CD48-203ENST00000613788 RBM8AQ9Y5S9 174 aaKnown RBP17.52■□□□□ 0.4
CD48-203ENST00000613788 CTR9Q6PD62 1173 aa17.52■□□□□ 0.39
CD48-203ENST00000613788 LDHDQ86WU2 507 aa17.52■□□□□ 0.39
CD48-203ENST00000613788 SAP30BPQ9UHR5 308 aaKnown RBP17.52■□□□□ 0.39
CD48-203ENST00000613788 PALD1Q9ULE6 856 aa17.52■□□□□ 0.39
CD48-203ENST00000613788 ZNF213O14771 459 aa17.51■□□□□ 0.39
CD48-203ENST00000613788 HLA-DOAP06340 250 aa17.51■□□□□ 0.39
CD48-203ENST00000613788 MCCP23508 829 aa17.51■□□□□ 0.39
CD48-203ENST00000613788 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
CD48-203ENST00000613788 ZFPM1Q8IX07 1006 aa17.51■□□□□ 0.39
CD48-203ENST00000613788 CNTNAP1P78357 1384 aa17.51■□□□□ 0.39
CD48-203ENST00000613788 ECM29Q5VYK3 1845 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 MINDY4BA8MYZ0 360 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 C12orf60Q5U649 245 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 RNF20Q5VTR2 975 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 CDC37L1Q7L3B6 337 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 TMEM39BQ9GZU3 492 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 PI4KBQ9UBF8 816 aa17.5■□□□□ 0.39
CD48-203ENST00000613788 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
CD48-203ENST00000613788 SLC3A2P08195 630 aaKnown RBP17.49■□□□□ 0.39
CD48-203ENST00000613788 FOXP4Q8IVH2 680 aaPredicted RBP17.49■□□□□ 0.39
CD48-203ENST00000613788 HOOK2Q96ED9 719 aa17.49■□□□□ 0.39
CD48-203ENST00000613788 SCAF8Q9UPN6 1271 aaKnown RBP17.49■□□□□ 0.39
CD48-203ENST00000613788 ATRNL1Q5VV63 1379 aa17.49■□□□□ 0.39
CD48-203ENST00000613788 DDTLA6NHG4 134 aaPredicted RBP17.48■□□□□ 0.39
CD48-203ENST00000613788 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
CD48-203ENST00000613788 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
CD48-203ENST00000613788 PPARAQ07869 468 aa17.48■□□□□ 0.39
CD48-203ENST00000613788 CSRNP1Q96S65 589 aa17.48■□□□□ 0.39
CD48-203ENST00000613788 ANAPC4Q9UJX5 808 aa17.48■□□□□ 0.39
CD48-203ENST00000613788 TAOK2Q9UL54 1235 aa17.48■□□□□ 0.39
CD48-203ENST00000613788 ZKSCAN1P17029 563 aaPredicted RBP17.47■□□□□ 0.39
CD48-203ENST00000613788 HSPA4P34932 840 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 PLCD1P51178 756 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 SUPT20HL1Q3ZLR7 823 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 CREB3L3Q68CJ9 461 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 SH3BP5LQ7L8J4 393 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 USP48Q86UV5 1035 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 CYP2D6P10635 497 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 HAND2P61296 217 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 TEPSINQ96N21 525 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 EHD4Q9H223 541 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 ZNF287Q9HBT7 754 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
CD48-203ENST00000613788 FOCADQ5VW36 1801 aa17.46■□□□□ 0.39
CD48-203ENST00000613788 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.39
CD48-203ENST00000613788 ADM5C9JUS6 153 aa17.46■□□□□ 0.39
CD48-203ENST00000613788 SLC27A2O14975 620 aa17.46■□□□□ 0.39
CD48-203ENST00000613788 CYP21A2P08686 494 aa17.46■□□□□ 0.39
CD48-203ENST00000613788 PDE4BQ07343 736 aa17.46■□□□□ 0.39
CD48-203ENST00000613788 MAP1SQ66K74 1059 aaPredicted RBP17.46■□□□□ 0.39
CD48-203ENST00000613788 CHADLQ6NUI6 762 aa17.46■□□□□ 0.39
CD48-203ENST00000613788 CRACR2BQ8N4Y2 399 aaPredicted RBP17.46■□□□□ 0.39
CD48-203ENST00000613788 GLIS2Q9BZE0 524 aaPredicted RBP17.46■□□□□ 0.39
CD48-203ENST00000613788 RNF41Q9H4P4 317 aaPredicted RBP17.46■□□□□ 0.39
CD48-203ENST00000613788 HERC5Q9UII4 1024 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms