RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 COL1A1P02452 1464 aaPredicted RBP10.59□□□□□ -0.71
CCDC47-207ENST00000612558 MYH13Q9UKX3 1938 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 PATL2C9JE40 543 aaKnown RBP10.59□□□□□ -0.71
CCDC47-207ENST00000612558 H0YIN7 160 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 GNAT2P19087 354 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 CYP7A1P22680 504 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 KCNC4Q03721 635 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 CUL4AQ13619 759 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 ANKRD1Q15327 319 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 ALX1Q15699 326 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
CCDC47-207ENST00000612558 STYK1Q6J9G0 422 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 SLC51AQ86UW1 340 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 C2CD5Q86YS7 1000 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 ZGPATQ8N5A5 531 aaKnown RBP10.59□□□□□ -0.71
CCDC47-207ENST00000612558 TBC1D16Q8TBP0 767 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 WDR66Q8TBY9 1149 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 SLC16A10Q8TF71 515 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
CCDC47-207ENST00000612558 POLLQ9UGP5 575 aa10.59□□□□□ -0.71
CCDC47-207ENST00000612558 ZNF213O14771 459 aa10.58□□□□□ -0.72
CCDC47-207ENST00000612558 MBD4O95243 580 aa10.58□□□□□ -0.72
CCDC47-207ENST00000612558 APPP05067 770 aa10.58□□□□□ -0.72
CCDC47-207ENST00000612558 CHAF1AQ13111 956 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-207ENST00000612558 TTLL5Q6EMB2 1281 aa10.58□□□□□ -0.72
CCDC47-207ENST00000612558 NAA16Q6N069 864 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-207ENST00000612558 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
CCDC47-207ENST00000612558 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.721e-7■□□□□ 10.2
CCDC47-207ENST00000612558 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
CCDC47-207ENST00000612558 SH2B1Q9NRF2 756 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-207ENST00000612558 LRRC37AA6NMS7 1700 aa10.58□□□□□ -0.72
CCDC47-207ENST00000612558 SALL1Q9NSC2 1324 aa10.58□□□□□ -0.72
CCDC47-207ENST00000612558 E7EWF7 191 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 C6orf229H3BNL8 230 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 IL1R1P14778 569 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 C6orf132Q5T0Z8 1188 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 STOX1Q6ZVD7 989 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 DHX32Q7L7V1 743 aaKnown RBP10.57□□□□□ -0.72
CCDC47-207ENST00000612558 MPNDQ8N594 471 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 NSUN4Q96CB9 384 aaKnown RBP10.57□□□□□ -0.72
CCDC47-207ENST00000612558 GPR101Q96P66 508 aaPredicted RBP10.57□□□□□ -0.72
CCDC47-207ENST00000612558 ARMT1Q9H993 441 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 CD209Q9NNX6 404 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 ZMYM6O95789 1325 aa10.57□□□□□ -0.72
CCDC47-207ENST00000612558 MAGEB6P1A0A0J9YX57 407 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 MECOMQ03112 1051 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 IFNL3Q8IZI9 196 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 LCORLQ8N3X6 602 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 CNKSR1Q969H4 720 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 NACAP1Q9BZK3 213 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 PDGFDQ9GZP0 370 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-207ENST00000612558 CACNA1SQ13698 1873 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 A0A0G2JLW4 131 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 GSG1L2A8MUP6 293 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 HAND2P61296 217 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 COL9A3Q14050 684 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-207ENST00000612558 TOB2Q14106 344 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-207ENST00000612558 NFKBIBQ15653 356 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 DPP8Q6V1X1 898 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-207ENST00000612558 ADGRA1Q86SQ6 560 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 MIGA1Q8NAN2 632 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 ZNF384Q8TF68 577 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 COA1Q9GZY4 146 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 NAPBQ9H115 298 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 SLC4A4Q9Y6R1 1079 aa10.56□□□□□ -0.72
CCDC47-207ENST00000612558 COL11A2P13942 1736 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-207ENST00000612558 LTBP1Q14766 1721 aa10.55□□□□□ -0.72
CCDC47-207ENST00000612558 LDHBP07195 334 aaKnown RBP10.55□□□□□ -0.72
CCDC47-207ENST00000612558 PRDX5P30044 214 aa10.55□□□□□ -0.72
CCDC47-207ENST00000612558 NUCB2P80303 420 aa10.55□□□□□ -0.72
CCDC47-207ENST00000612558 EXOSC10Q01780 885 aaKnown RBP10.55□□□□□ -0.72
CCDC47-207ENST00000612558 RAB3GAP1Q15042 981 aa10.55□□□□□ -0.72
CCDC47-207ENST00000612558 NCOA7Q8NI08 942 aa10.55□□□□□ -0.72
CCDC47-207ENST00000612558 TCEANC2Q96MN5 208 aa10.55□□□□□ -0.72
CCDC47-207ENST00000612558 RIOK1Q9BRS2 568 aaKnown RBP10.55□□□□□ -0.72
CCDC47-207ENST00000612558 ZC3H12CQ9C0D7 883 aaKnown RBP10.55□□□□□ -0.72
CCDC47-207ENST00000612558 EPB41L4AQ9HCS5 686 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-207ENST00000612558 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-207ENST00000612558 CCDC88AQ3V6T2 1871 aa10.55□□□□□ -0.72
CCDC47-207ENST00000612558 PRKAB2O43741 272 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 GSTO1P78417 241 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 FGD1P98174 961 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 TRDNQ13061 729 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 NBR1Q14596 966 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 ME3Q16798 604 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 Q6ZUG5 572 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 DZIP1Q86YF9 867 aaKnown RBP10.54□□□□□ -0.72
CCDC47-207ENST00000612558 FBXL16Q8N461 479 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 TBC1D22AQ8WUA7 517 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 EYA3Q99504 573 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-207ENST00000612558 TPCN1Q9ULQ1 816 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 JAG2Q9Y219 1238 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 LAMA4Q16363 1823 aa10.54□□□□□ -0.72
CCDC47-207ENST00000612558 LARGE1O95461 756 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 CHRNA5P30532 468 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 MCM5P33992 734 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 TDO2P48775 406 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 GIMAP6Q6P9H5 292 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms