RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 WTIPA6NIX2 430 aaPredicted RBP16.16■□□□□ 0.18
COL6A1-207ENST00000612273 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 PCDHB6Q9Y5E3 794 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 SLIT3O75094 1523 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 PCCAP05165 728 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-207ENST00000612273 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 SDR42E1Q8WUS8 393 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL6A1-207ENST00000612273 SAMSN1Q9NSI8 373 aaKnown RBP16.15■□□□□ 0.18
COL6A1-207ENST00000612273 MTMR7Q9Y216 660 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 TACC3Q9Y6A5 838 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 STARD3NLO95772 234 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 BCAMP50895 628 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 EVCP57679 992 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 FMR1Q06787 632 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL6A1-207ENST00000612273 TEX35Q5T0J7 233 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 NLRP10Q86W26 655 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 EPB41L4AQ9HCS5 686 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-207ENST00000612273 IMPACTQ9P2X3 320 aa16.15■□□□□ 0.18
COL6A1-207ENST00000612273 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL6A1-207ENST00000612273 AFDNP55196 1824 aaKnown RBP16.15■□□□□ 0.18
COL6A1-207ENST00000612273 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.18
COL6A1-207ENST00000612273 CDKL5O76039 1030 aa16.14■□□□□ 0.18
COL6A1-207ENST00000612273 ETF1P62495 437 aaKnown RBP16.14■□□□□ 0.18
COL6A1-207ENST00000612273 PTPAQ15257 358 aa16.14■□□□□ 0.18
COL6A1-207ENST00000612273 SAFBQ15424 915 aaKnown RBP eCLIP16.14■□□□□ 0.18
COL6A1-207ENST00000612273 IFNL3Q8IZI9 196 aa16.14■□□□□ 0.18
COL6A1-207ENST00000612273 DHX58Q96C10 678 aa16.14■□□□□ 0.18
COL6A1-207ENST00000612273 FANCGO15287 622 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 PDE8BO95263 885 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 CLCN6P51797 869 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 CTSWP56202 376 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 MTF1Q14872 753 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 KRBA2Q6ZNG9 492 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 IGDCC4Q8TDY8 1250 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 LY9Q9HBG7 655 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 FAM217BQ9NTX9 383 aaPredicted RBP16.14■□□□□ 0.17
COL6A1-207ENST00000612273 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
COL6A1-207ENST00000612273 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 UTP14CQ5TAP6 766 aaKnown RBP16.14■□□□□ 0.17
COL6A1-207ENST00000612273 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 CADPS2Q86UW7 1296 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 STRBPQ96SI9 672 aaKnown RBP16.14■□□□□ 0.17
COL6A1-207ENST00000612273 MPHOSPH8Q99549 860 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 LZTFL1Q9NQ48 299 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 BAZ2BQ9UIF8 2168 aaKnown RBP16.14■□□□□ 0.17
COL6A1-207ENST00000612273 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
COL6A1-207ENST00000612273 RASGRF1Q13972 1273 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 A0A0U1RQG5 324 aaPredicted RBP16.13■□□□□ 0.17
COL6A1-207ENST00000612273 LCORLQ8N3X6 602 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 KRI1Q8N9T8 703 aaKnown RBP16.13■□□□□ 0.17
COL6A1-207ENST00000612273 CCDC34Q96HJ3 373 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 WDR24Q96S15 920 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 A0A0U1RQJ8 604 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 TOGARAM2Q6ZUX3 1019 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 ATRIPQ8WXE1 791 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 ATG3Q9NT62 314 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 VPS54Q9P1Q0 977 aa16.13■□□□□ 0.17
COL6A1-207ENST00000612273 NTRK3Q16288 839 aa16.12■□□□□ 0.17
COL6A1-207ENST00000612273 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
COL6A1-207ENST00000612273 NOSTRINQ8IVI9 506 aa16.12■□□□□ 0.17
COL6A1-207ENST00000612273 MAP3K14Q99558 947 aa16.12■□□□□ 0.17
COL6A1-207ENST00000612273 INTS13Q9NVM9 706 aa16.12■□□□□ 0.17
COL6A1-207ENST00000612273 TOB1P50616 345 aaPredicted RBP16.12■□□□□ 0.17
COL6A1-207ENST00000612273 RTN1Q16799 776 aa16.12■□□□□ 0.17
COL6A1-207ENST00000612273 TRIM22Q8IYM9 498 aa16.12■□□□□ 0.17
COL6A1-207ENST00000612273 SPATA5Q8NB90 893 aa16.12■□□□□ 0.17
COL6A1-207ENST00000612273 ZCCHC17Q9NP64 241 aaKnown RBP16.12■□□□□ 0.17
COL6A1-207ENST00000612273 JAG2Q9Y219 1238 aa16.12■□□□□ 0.17
COL6A1-207ENST00000612273 ZBTB22O15209 634 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-207ENST00000612273 EPSTI1Q96J88 318 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 ERICH2A1L162 156 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 TFRCP02786 760 aaKnown RBP16.11■□□□□ 0.17
COL6A1-207ENST00000612273 WTAPQ15007 396 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 POSTNQ15063 836 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
COL6A1-207ENST00000612273 BAG1Q99933 345 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-207ENST00000612273 MAN1B1Q9UKM7 699 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 MAPK8IP1Q9UQF2 711 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 MORC2Q9Y6X9 1032 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-207ENST00000612273 CSF1RP07333 972 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 SLFN14P0C7P3 912 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 MAP3K12Q12852 859 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 RESP18Q5W5W9 173 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
COL6A1-207ENST00000612273 SMARCE1Q969G3 411 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 PPP2R2CQ9Y2T4 447 aa16.11■□□□□ 0.17
COL6A1-207ENST00000612273 BRINP3Q76B58 766 aa16.1■□□□□ 0.17
COL6A1-207ENST00000612273 EEF2KMTQ96G04 330 aa16.1■□□□□ 0.17
COL6A1-207ENST00000612273 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
COL6A1-207ENST00000612273 MAP3K15Q6ZN16 1313 aa16.1■□□□□ 0.17
COL6A1-207ENST00000612273 TEX33O43247 280 aa16.1■□□□□ 0.17
COL6A1-207ENST00000612273 CBFA2T2O43439 604 aa16.1■□□□□ 0.17
COL6A1-207ENST00000612273 SYCP1Q15431 976 aa16.1■□□□□ 0.17
COL6A1-207ENST00000612273 VSTM4Q8IW00 320 aa16.1■□□□□ 0.17
COL6A1-207ENST00000612273 UBAC1Q9BSL1 405 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms