RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 ELL2O00472 640 aaPredicted RBP9.09□□□□□ -0.95
CLK4-214ENST00000611575 ITGA6P23229 1130 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 CLK2P49760 499 aaKnown RBP9.09□□□□□ -0.95
CLK4-214ENST00000611575 GTF2IP78347 998 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 CALD1Q05682 793 aaKnown RBP9.09□□□□□ -0.95
CLK4-214ENST00000611575 CHRNDQ07001 517 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 GCKRQ14397 625 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 SLC10A4Q96EP9 437 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 ERO1AQ96HE7 468 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 PRMT6Q96LA8 375 aaPredicted RBP9.09□□□□□ -0.95
CLK4-214ENST00000611575 NBPF3Q9H094 633 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 RABGEF1Q9UJ41 708 aa9.09□□□□□ -0.95
CLK4-214ENST00000611575 FAM205AQ6ZU69 1335 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 SNAP23O00161 211 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 APAF1O14727 1248 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 EN2P19622 333 aaPredicted RBP9.08□□□□□ -0.96
CLK4-214ENST00000611575 IGHMBP2P38935 993 aaKnown RBP9.08□□□□□ -0.96
CLK4-214ENST00000611575 WDR43Q15061 677 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLK4-214ENST00000611575 DLGAP5Q15398 846 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 CCDC27Q2M243 656 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 NBPF12Q5TAG4 269 aaPredicted RBP9.08□□□□□ -0.96
CLK4-214ENST00000611575 G2E3Q7L622 706 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 UBE3BQ7Z3V4 1068 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 CD99L2Q8TCZ2 262 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 COL6A3P12111 3177 aa9.08□□□□□ -0.96
CLK4-214ENST00000611575 DDX11L8A8MPP1 907 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
CLK4-214ENST00000611575 FOXO4P98177 505 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 SP3Q02447 781 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 PRKG1Q13976 671 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 SUPT20HL1Q3ZLR7 823 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 CFAP100Q494V2 611 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.07□□□□□ -0.96
CLK4-214ENST00000611575 ANKRD13AQ8IZ07 590 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 BRI3BPQ8WY22 251 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 PRO3102Q9H379 93 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 PRKRIP1Q9H875 184 aaPredicted RBP9.07□□□□□ -0.96
CLK4-214ENST00000611575 EFCC1Q9HA90 598 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 A0A0C4DFX4 3053 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 A0A1B0GUL6 1792 aa9.07□□□□□ -0.96
CLK4-214ENST00000611575 ECM29Q5VYK3 1845 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 MYH3P11055 1940 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 NEXNQ0ZGT2 675 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 RASA3Q14644 834 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 UBE2Q1Q7Z7E8 422 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 LINS1Q8NG48 757 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.06□□□□□ -0.96
CLK4-214ENST00000611575 ZCCHC17Q9NP64 241 aaKnown RBP9.06□□□□□ -0.96
CLK4-214ENST00000611575 LIMD1Q9UGP4 676 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 SERPINA10Q9UK55 444 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 OTOFQ9HC10 1997 aa9.06□□□□□ -0.96
CLK4-214ENST00000611575 SPTLC1O15269 473 aa9.05□□□□□ -0.96
CLK4-214ENST00000611575 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
CLK4-214ENST00000611575 MCM6Q14566 821 aa9.05□□□□□ -0.96
CLK4-214ENST00000611575 OTUD7BQ6GQQ9 843 aa9.05□□□□□ -0.96
CLK4-214ENST00000611575 TDRD7Q8NHU6 1098 aaKnown RBP9.05□□□□□ -0.96
CLK4-214ENST00000611575 MPHOSPH8Q99549 860 aa9.05□□□□□ -0.96
CLK4-214ENST00000611575 IL16Q14005 1332 aa9.05□□□□□ -0.96
CLK4-214ENST00000611575 SPEF2Q9C093 1822 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 CLRN2A0PK11 232 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 TAF5LO75529 589 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 BCAMP50895 628 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 VGLL4Q14135 290 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 PPP2R2DQ66LE6 453 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 FAM43AQ8N2R8 423 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 DNAAF4Q8WXU2 420 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 TSR2Q969E8 191 aaKnown RBP9.04□□□□□ -0.96
CLK4-214ENST00000611575 OPTNQ96CV9 577 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 SHISA4Q96DD7 197 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 ZNF70Q9UC06 446 aaPredicted RBP9.04□□□□□ -0.96
CLK4-214ENST00000611575 SEPT9Q9UHD8 586 aaPredicted RBP9.04□□□□□ -0.96
CLK4-214ENST00000611575 PTCH2Q9Y6C5 1203 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 ADGRA2Q96PE1 1338 aa9.04□□□□□ -0.96
CLK4-214ENST00000611575 ANKRD18BA2A2Z9 1011 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 MYO1BO43795 1136 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 TLR2O60603 784 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 TNFAIP1Q13829 316 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 TWISTNBQ3B726 338 aaPredicted RBP9.03□□□□□ -0.96
CLK4-214ENST00000611575 EPHA10Q5JZY3 1008 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 ZNF804AQ7Z570 1209 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 WWC1Q8IX03 1113 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 MRIQ9BWK5 157 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 STK31Q9BXU1 1019 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 MYH16Q9H6N6 1097 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 SNCAIPQ9Y6H5 919 aa9.03□□□□□ -0.96
CLK4-214ENST00000611575 ARAP2Q8WZ64 1704 aa9.02□□□□□ -0.96
CLK4-214ENST00000611575 RPAP1Q9BWH6 1393 aaPredicted RBP9.02□□□□□ -0.97
CLK4-214ENST00000611575 MOXD2PA6NHM9 499 aa9.02□□□□□ -0.97
CLK4-214ENST00000611575 VAMP4O75379 141 aa9.02□□□□□ -0.97
CLK4-214ENST00000611575 GNRH1P01148 92 aa9.02□□□□□ -0.97
CLK4-214ENST00000611575 CTGFP29279 349 aa9.02□□□□□ -0.97
CLK4-214ENST00000611575 GTF2A2P52657 109 aa9.02□□□□□ -0.97
CLK4-214ENST00000611575 LACTBP83111 547 aaPredicted RBP9.02□□□□□ -0.97
CLK4-214ENST00000611575 HDLBPQ00341 1268 aaKnown RBP9.02□□□□□ -0.97
CLK4-214ENST00000611575 DDX10Q13206 875 aaKnown RBP9.02□□□□□ -0.97
CLK4-214ENST00000611575 IFIT5Q13325 482 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms